RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 LINGO2Q7L985 606 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 TMEM123Q8N131 208 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 ZNF611Q8N823 705 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 PIGTQ969N2 578 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 ALG2Q9H553 416 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 FKRPQ9H9S5 495 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 MEPEQ9NQ76 525 aaPredicted RBP11.7□□□□□ -0.54
COMMD1-206ENST00000458337 SLC17A5Q9NRA2 495 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 FAM53CQ9NYF3 392 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 TAS2R5Q9NYW4 299 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 NPAP1Q9NZP6 1156 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 RNF115Q9Y4L5 304 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 NOX1Q9Y5S8 564 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 USF3Q68DE3 2245 aa11.7□□□□□ -0.54
COMMD1-206ENST00000458337 HS3ST1O14792 307 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 CD3EP07766 207 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 HLA-DOBP13765 273 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 HOXB1P14653 301 aaPredicted RBP11.69□□□□□ -0.54
COMMD1-206ENST00000458337 RBM34P42696 430 aaKnown RBP11.69□□□□□ -0.54
COMMD1-206ENST00000458337 BSPH1Q075Z2 132 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 LGALS3BPQ08380 585 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 PUDPQ08623 228 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 LRRC23Q53EV4 343 aaPredicted RBP11.69□□□□□ -0.54
COMMD1-206ENST00000458337 ALKBH2Q6NS38 261 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 CBLL1Q75N03 491 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 NKAIN4Q8IVV8 208 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 UEVLDQ8IX04 471 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 OR5J2Q8NH18 312 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 MAGEE2Q8TD90 523 aaPredicted RBP11.69□□□□□ -0.54
COMMD1-206ENST00000458337 LZICQ8WZA0 190 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 BCL2L2Q92843 193 aaPredicted RBP11.69□□□□□ -0.54
COMMD1-206ENST00000458337 LRR1Q96L50 414 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 HS6ST2Q96MM7 605 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 LRRC37BQ96QE4 947 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 OR2M2Q96R28 347 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 CCT8L2Q96SF2 557 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 UBTD1Q9HAC8 227 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 ZNF229Q9UJW7 825 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 A4GNTQ9UNA3 340 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 VPS13CQ709C8 3753 aa11.69□□□□□ -0.54
COMMD1-206ENST00000458337 FLNAP21333 2647 aaKnown RBP11.68□□□□□ -0.54
COMMD1-206ENST00000458337 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
COMMD1-206ENST00000458337 HTR3EA5X5Y0 456 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 ZNF587BE7ETH6 402 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 SHOX2O60902 331 aaPredicted RBP11.68□□□□□ -0.54
COMMD1-206ENST00000458337 TMCC2O75069 709 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 SLC43A1O75387 559 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 CH25HO95992 272 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 MT-ND1P03886 318 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 TSPAN19P0C672 248 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 ASAH2BP0C7U1 165 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 NQO1P15559 274 aaKnown RBP11.68□□□□□ -0.54
COMMD1-206ENST00000458337 PAX1P15863 534 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 PTNP21246 168 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 PAX7P23759 505 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 HOXC12P31275 282 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 TAS2R41P59536 307 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 FXNQ16595 210 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 C9orf135Q5VTT2 229 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 DEF8Q6ZN54 512 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 SLC46A3Q7Z3Q1 461 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 C20orf196Q8IYI0 205 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 LRRC75A-AS1Q8N1F1 130 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 C10orf53Q8N6V4 93 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 LRRC17Q8N6Y2 441 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 PIK3C3Q8NEB9 887 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 OR1K1Q8NGR3 316 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 OR52N5Q8NH56 324 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 LIPHQ8WWY8 451 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 AKAP1Q92667 903 aaKnown RBP eCLIP11.68□□□□□ -0.54
COMMD1-206ENST00000458337 TXNDC15Q96J42 360 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 TPD52L3Q96J77 140 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 RADILQ96JH8 1075 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 SPAG4Q9NPE6 437 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 OBP2BQ9NPH6 170 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 NANSQ9NR45 359 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 AMDHD2Q9Y303 409 aa11.68□□□□□ -0.54
COMMD1-206ENST00000458337 SLC35F4A4IF30 521 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 SHISA9B4DS77 424 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 GSTA4O15217 222 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 AKAP8O43823 692 aaKnown RBP11.67□□□□□ -0.54
COMMD1-206ENST00000458337 DCTN3O75935 186 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 KRT33AO76009 404 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 DANCRP0C864 163 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 PTAFRP25105 342 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 SH3BGRP55822 239 aaPredicted RBP11.67□□□□□ -0.54
COMMD1-206ENST00000458337 PRPS1P60891 318 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 SLC25A3Q00325 362 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 ROR2Q01974 943 aaKnown RBP11.67□□□□□ -0.54
COMMD1-206ENST00000458337 ST3GAL3Q11203 375 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 ZNF672Q499Z4 452 aaPredicted RBP11.67□□□□□ -0.54
COMMD1-206ENST00000458337 ANKRD16Q6P6B7 361 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 KLHL17Q6TDP4 642 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 TMEM108Q6UXF1 575 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 VTCN1Q7Z7D3 282 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 TGIF2LYQ8IUE0 185 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 TMEM255BQ8WV15 326 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 TMEM239Q8WW34 195 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 PRRC1Q96M27 445 aa11.67□□□□□ -0.54
COMMD1-206ENST00000458337 KCTD14Q9BQ13 255 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms