RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CH25HO95992 272 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 HLA-DOBP13765 273 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 TCN1P20061 433 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-205ENST00000454542 MPGP29372 298 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 CLDN17P56750 224 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 MXRA7P84157 204 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 VLDLRP98155 873 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 POU3F1Q03052 451 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-205ENST00000454542 FAPQ12884 760 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 BEX5Q5H9J7 111 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 TIMM23BQ5SRD1 257 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 NIPAL3Q6P499 406 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 LINGO2Q7L985 606 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 PXKQ7Z7A4 578 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 P2RY8Q86VZ1 359 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 UEVLDQ8IX04 471 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 NSMCE2Q96MF7 247 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 ALKBH3Q96Q83 286 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-205ENST00000454542 OR2M2Q96R28 347 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 POLDIP3Q9BY77 421 aaKnown RBP12.47□□□□□ -0.41
HDAC4-205ENST00000454542 MUC13Q9H3R2 512 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 PLEKHF2Q9H8W4 249 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 NANSQ9NR45 359 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 C20orf141Q9NUB4 165 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 TAS2R1Q9NYW7 299 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 NDUFAF4Q9P032 175 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 ACTR3BQ9P1U1 418 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 NOX1Q9Y5S8 564 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 POLQO75417 2590 aa12.47□□□□□ -0.41
HDAC4-205ENST00000454542 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-205ENST00000454542 OR5H1A6NKK0 313 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 RPL36A-HNRNPH2H7BZ11 118 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 CASKO14936 926 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 PIP5K1CO60331 668 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 UBOX5O94941 541 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 NQO1P15559 274 aaKnown RBP12.46□□□□□ -0.41
HDAC4-205ENST00000454542 ATP6V1B2P21281 511 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 IFNA8P32881 189 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 RPS4XP62701 263 aaKnown RBP12.46□□□□□ -0.41
HDAC4-205ENST00000454542 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDAC4-205ENST00000454542 PMS2P3Q13401 168 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 TRAM2Q15035 370 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 GABRA6Q16445 453 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 MTX3Q5HYI7 312 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 C1QTNF12Q5T7M4 302 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 LCN8Q6JVE9 175 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 FKBP9P1Q75LS8 142 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 CDH24Q86UP0 819 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 WDFY1Q8IWB7 410 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 UBE2J2Q8N2K1 259 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 ANKK1Q8NFD2 765 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 ACOT11Q8WXI4 607 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-205ENST00000454542 HSD17B8Q92506 261 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 SGTBQ96EQ0 304 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 ZC3HAV1LQ96H79 300 aaKnown RBP12.46□□□□□ -0.41
HDAC4-205ENST00000454542 MUS81Q96NY9 551 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 HS3ST6Q96QI5 342 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 TMEM204Q9BSN7 226 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 TAS2R5Q9NYW4 299 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 MED31Q9Y3C7 131 aa12.46□□□□□ -0.41
HDAC4-205ENST00000454542 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.42
HDAC4-205ENST00000454542 ABCA4P78363 2273 aa12.46□□□□□ -0.42
HDAC4-205ENST00000454542 PRR14LQ5THK1 2151 aa12.46□□□□□ -0.42
HDAC4-205ENST00000454542 A0A1W2PRQ8 180 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 TCRBV5S2A0A599 114 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 NPIPB13A6NJU9 1138 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 NPIPB4C9JG80 1138 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 GMNNO75496 209 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 UPK3AO75631 287 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 RAD51DO75771 328 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 RHCEP18577 417 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 DNAJA1P31689 397 aaKnown RBP12.45□□□□□ -0.42
HDAC4-205ENST00000454542 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-205ENST00000454542 YAP1P46937 504 aaKnown RBP12.45□□□□□ -0.42
HDAC4-205ENST00000454542 LGALS3BPQ08380 585 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 DGCR6Q14129 220 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 OR7E24Q6IFN5 339 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 PAMR1Q6UXH9 720 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 NANOGNBQ7Z5D8 188 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 ABHD12BQ7Z5M8 362 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-205ENST00000454542 C10orf53Q8N6V4 93 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 LRRC17Q8N6Y2 441 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 PYURFQ96I23 114 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 FUZQ9BT04 418 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 FNDC11Q9BVV2 318 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 NELFAQ9H3P2 528 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 NMNAT1Q9HAN9 279 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-205ENST00000454542 NPAP1Q9NZP6 1156 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 UPB1Q9UBR1 384 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 HIF3AQ9Y2N7 669 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 SLC25A15Q9Y619 301 aa12.45□□□□□ -0.42
HDAC4-205ENST00000454542 OTOGQ6ZRI0 2925 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 A0A087WUU8 490 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 ZNF587BE7ETH6 402 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 SLC43A1O75387 559 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 ADORA3P0DMS8 318 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 MAGEA2P43356 314 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 NR1H2P55055 460 aa12.44□□□□□ -0.42
HDAC4-205ENST00000454542 SH3BGRP55822 239 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms