RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 DHFR2Q86XF0 187 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 PACRGLQ8N7B6 248 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 LMNTD1Q8N9Z9 388 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 OR13C5Q8NGS8 318 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 PROKR1Q8TCW9 393 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 SETD7Q8WTS6 366 aaKnown RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 CCDC124Q96CT7 223 aaKnown RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 SCARF2Q96GP6 870 aaPredicted RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 ATP13A2Q9NQ11 1180 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 NLGN3Q9NZ94 848 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 OPN4Q9UHM6 478 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 MEMO1Q9Y316 297 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 PCM1Q15154 2024 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 ANKRD12Q6UB98 2062 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3DA0A087WVF3 549 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3IA0A087WXS9 549 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3EA0A087X179 549 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 ASPDHA6ND91 283 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3BA6NDS4 549 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3FA6NER0 549 aaPredicted RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3LB9A6J9 549 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 ACOX3O15254 700 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 OR10H3O60404 316 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3HP0C7X1 549 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 MPZP25189 248 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 GTF2E2P29084 291 aaKnown RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 AHRP35869 848 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 ART1P52961 327 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 LSM6P62312 80 aaKnown RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 RPL11P62913 178 aaKnown RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 CCNJQ5T5M9 372 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3GQ6DHY5 549 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3CQ6IPX1 549 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 HMBOX1Q6NT76 420 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 LRRC56Q8IYG6 542 aaPredicted RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TBC1D3Q8IZP1 549 aaPredicted RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 OR52B6Q8NGF0 335 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 OR2L2Q8NH16 312 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 DYNC2LI1Q8TCX1 351 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 NETO1Q8TDF5 533 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 TMEM125Q96AQ2 219 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 SLCO4A1Q96BD0 722 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 CXorf40BQ96DE9 158 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 NUS1Q96E22 293 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 PRRT1Q99946 306 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 RIOK2Q9BVS4 552 aaKnown RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 NMNAT2Q9BZQ4 307 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 FN3KQ9H479 309 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 CLMPQ9H6B4 373 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 MTHFD2LQ9H903 347 aaPredicted RBP7.08□□□□□ -1.28
BRCC3-208ENST00000453705 PRDM7Q9NQW5 492 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 POLE4Q9NR33 117 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 KCNG2Q9UJ96 466 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 CDC42EP3Q9UKI2 254 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 A4GNTQ9UNA3 340 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 USP22Q9UPT9 525 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 PIGLQ9Y2B2 252 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 NEUROG3Q9Y4Z2 214 aa7.08□□□□□ -1.28
BRCC3-208ENST00000453705 NPIPA5A0A0B4J1W7 369 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 FAM172BPA6NC97 362 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 NPIPA5E9PKD4 350 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 NPIPA3F8WFD2 350 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 J3QL48 77 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 TMPRSS2O15393 492 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 NDUFS4O43181 175 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 CST4P01036 141 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 CATP04040 527 aaKnown RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 KLK3P07288 261 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 PSMC3P17980 439 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 CXCR2P25025 360 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ELAVL4P26378 380 aaKnown RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ACADLP28330 430 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 PRDX3P30048 256 aaKnown RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 CALCRP30988 508 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 POLR2JP52435 117 aaKnown RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 VLDLRP98155 873 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 CD300CQ08708 224 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 SELENBP1Q13228 472 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ZBED5Q49AG3 693 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 HPS6Q86YV9 775 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF100Q8IYN0 542 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 LRRC18Q8N456 261 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 LILRA3Q8N6C8 439 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 TSPAN14Q8NG11 270 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 OR9A2Q8NGT5 310 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 OR14L1PQ8NHC6 308 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 WDR20Q8TBZ3 569 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 LRRC58Q96CX6 371 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 SENP5Q96HI0 755 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 SLC45A3Q96JT2 553 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF385AQ96PM9 386 aaKnown RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 KCNA7Q96RP8 456 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ACOX2Q99424 681 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 TEX101Q9BY14 249 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 TPSD1Q9BZJ3 242 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 MARCH7Q9H992 704 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 C1orf109Q9NX04 203 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 SPHK1Q9NYA1 384 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms