RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 RPL18Q07020 188 aaKnown RBP13.9□□□□□ -0.18
RBM39-219ENST00000453310 TFF3Q07654 80 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 ZP4Q12836 540 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 C1DQ13901 141 aaKnown RBP13.9□□□□□ -0.18
RBM39-219ENST00000453310 FBXL19-AS1Q494R0 122 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 CASP12Q6UXS9 341 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 TFAP2EQ6VUC0 442 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 PXKQ7Z7A4 578 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 UEVLDQ8IX04 471 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 ZIC4Q8N9L1 334 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 ZNF610Q8N9Z0 462 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 OR13C2Q8NGS9 318 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 DENND2DQ9H6A0 471 aaPredicted RBP13.9□□□□□ -0.18
RBM39-219ENST00000453310 ARMC1Q9NVT9 282 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 TAS2R5Q9NYW4 299 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 AP4S1Q9Y587 144 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 NOX1Q9Y5S8 564 aa13.9□□□□□ -0.18
RBM39-219ENST00000453310 TRAV27A0A087WT01 109 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 A1L4Q6 167 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 RNF13O43567 381 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 MRPL33O75394 65 aaKnown RBP13.89□□□□□ -0.19
RBM39-219ENST00000453310 SERPINI2O75830 405 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 CCNB2O95067 398 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 CLDN1O95832 211 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 TSPAN19P0C672 248 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 HLA-DOBP13765 273 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 EDNRAP25101 427 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 UQCRC1P31930 480 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 AQP2P41181 271 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 SLC9A3P48764 834 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 IST1P53990 364 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 CLDN17P56750 224 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 RPS4XP62701 263 aaKnown RBP13.89□□□□□ -0.19
RBM39-219ENST00000453310 POU3F1Q03052 451 aaPredicted RBP13.89□□□□□ -0.19
RBM39-219ENST00000453310 GK3PQ14409 553 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 LAPTM4AQ15012 233 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.89□□□□□ -0.19
RBM39-219ENST00000453310 ZER1Q7Z7L7 766 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 OAFQ86UD1 273 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 STK32CQ86UX6 486 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 ZNF100Q8IYN0 542 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 LINC00471Q8N535 108 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 ANKK1Q8NFD2 765 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 OR9Q2Q8NGE9 314 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 APH1AQ96BI3 265 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 RBM24Q9BX46 236 aaKnown RBP13.89□□□□□ -0.19
RBM39-219ENST00000453310 PARPBPQ9NWS1 579 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 DNAJB9Q9UBS3 223 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 HIF3AQ9Y2N7 669 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 KLF2Q9Y5W3 355 aaPredicted RBP13.89□□□□□ -0.19
RBM39-219ENST00000453310 DOPEY2Q9Y3R5 2298 aa13.89□□□□□ -0.19
RBM39-219ENST00000453310 ADGRG4Q8IZF6 3080 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 FREM1Q5H8C1 2179 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 CLOCKO15516 846 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 HNRNPRO43390 633 aaKnown RBP13.88□□□□□ -0.19
RBM39-219ENST00000453310 KLF4O43474 513 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 DEAF1O75398 565 aaPredicted RBP13.88□□□□□ -0.19
RBM39-219ENST00000453310 E2F6O75461 281 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 DNAJA1P31689 397 aaKnown RBP13.88□□□□□ -0.19
RBM39-219ENST00000453310 FHL1Q13642 323 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 MICAQ29983 383 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 ANKDD1AQ495B1 522 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 C1orf94Q6P1W5 598 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 PGBD2Q6P3X8 592 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 ZNF474Q6S9Z5 364 aaPredicted RBP13.88□□□□□ -0.19
RBM39-219ENST00000453310 AAED1Q7RTV5 226 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 OR51A7Q8NH64 312 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 MOSPD2Q8NHP6 518 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 PYDC1Q8WXC3 89 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 RNASE6Q93091 150 aaKnown RBP13.88□□□□□ -0.19
RBM39-219ENST00000453310 LRRC46Q96FV0 321 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 GPA33Q99795 319 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 GALNT8Q9NY28 637 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 PRSS50Q9UI38 385 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 RCE1Q9Y256 329 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 HCFC1P51610 2035 aa13.88□□□□□ -0.19
RBM39-219ENST00000453310 SPTAN1Q13813 2472 aaKnown RBP13.87□□□□□ -0.19
RBM39-219ENST00000453310 ANKRD65E5RJM6 399 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 PRSS44E7EML9 344 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 AKAP8O43823 692 aaKnown RBP13.87□□□□□ -0.19
RBM39-219ENST00000453310 F13BP05160 661 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 FCGR1AP12314 374 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 IFNGR1P15260 489 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 FPR3P25089 353 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 FASP25445 335 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 GRNP28799 593 aaKnown RBP13.87□□□□□ -0.19
RBM39-219ENST00000453310 SELENOPP49908 381 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 ATP6AP1Q15904 470 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 ZBED5Q49AG3 693 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 ALG10Q5BKT4 473 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 ZNF770Q6IQ21 691 aaPredicted RBP13.87□□□□□ -0.19
RBM39-219ENST00000453310 ZFP1Q6P2D0 407 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 NIPAL3Q6P499 406 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 NHLRC1Q6VVB1 395 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 BEND4Q6ZU67 534 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 TMEM179BQ7Z7N9 219 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 AQP11Q8NBQ7 271 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 OR10G2Q8NGC3 310 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 GNPDA2Q8TDQ7 276 aa13.87□□□□□ -0.19
RBM39-219ENST00000453310 PSMG3-AS1Q96PY0 264 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms