RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ANKK1Q8NFD2 765 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 BCL2L2Q92843 193 aaPredicted RBP14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 TXNDC15Q96J42 360 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 OR2M2Q96R28 347 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 PIP5K1AQ99755 562 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 NELFAQ9H3P2 528 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 ALG2Q9H553 416 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 SLC17A5Q9NRA2 495 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 MAN2C1Q9NTJ4 1040 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 CD300AQ9UGN4 299 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 ARID1AO14497 2285 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 PLCE1Q9P212 2302 aa14.13□□□□□ -0.15
SCAMP4-205ENST00000452128 OR6C65A6NJZ3 312 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 NDUFAB1O14561 156 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 RAD51DO75771 328 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 HOXC12P31275 282 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 RBM34P42696 430 aaKnown RBP14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 CLDN17P56750 224 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 LSM11P83369 360 aaKnown RBP eCLIP14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 IQCCQ4KMZ1 466 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 LRRC23Q53EV4 343 aaPredicted RBP14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 PHYHD1Q5SRE7 291 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 PXKQ7Z7A4 578 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 C17orf78Q8N4C9 275 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 OR5J2Q8NH18 312 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 ZNF837Q96EG3 531 aaPredicted RBP14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 FKRPQ9H9S5 495 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 EDARQ9UNE0 448 aa14.12□□□□□ -0.15
SCAMP4-205ENST00000452128 USF3Q68DE3 2245 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 SHISA9B4DS77 424 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 HS3ST1O14792 307 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 CH25HO95992 272 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 MT-ND1P03886 318 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 PAX1P15863 534 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 UGT2B15P54855 530 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 BSPH1Q075Z2 132 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 PUDPQ08623 228 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 PMS2P3Q13401 168 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 KEAP1Q14145 624 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 C9orf135Q5VTT2 229 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 NIPAL3Q6P499 406 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 TTC33Q6PID6 262 aaPredicted RBP14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 C20orf204Q6ZNR8 217 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 C20orf196Q8IYI0 205 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 FITM2Q8N6M3 262 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 ZNF611Q8N823 705 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 MAGEE2Q8TD90 523 aaPredicted RBP14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 TMEM255BQ8WV15 326 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 NEUROG1Q92886 237 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 MUCL1Q96DR8 90 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 LRR1Q96L50 414 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 LRRC37BQ96QE4 947 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 NGBQ9NPG2 151 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 C20orf141Q9NUB4 165 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 BEX4Q9NWD9 120 aaPredicted RBP14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 UPB1Q9UBR1 384 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 NOX1Q9Y5S8 564 aa14.11□□□□□ -0.15
SCAMP4-205ENST00000452128 CIB4A0PJX0 185 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 DANCRP0C864 163 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 HSD17B1P14061 328 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 FHL1Q13642 323 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 KRT72Q14CN4 511 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 STK11Q15831 433 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 DEF8Q6ZN54 512 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 OR1K1Q8NGR3 316 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 OR52N5Q8NH56 324 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 RNF217Q8TC41 542 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 AKAP1Q92667 903 aaKnown RBP eCLIP14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 TPD52L3Q96J77 140 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 C7orf34Q96L11 122 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 ASPNQ9BXN1 380 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 ESRP2Q9H6T0 727 aaKnown RBP14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 GPR35Q9HC97 309 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 SPAG4Q9NPE6 437 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 TAGLN3Q9UI15 199 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 ZNF229Q9UJW7 825 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 RNF115Q9Y4L5 304 aa14.1□□□□□ -0.15
SCAMP4-205ENST00000452128 A0A1W2PR80 420 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 SLC35F4A4IF30 521 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 J3KTA2 159 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 OVOL3O00110 214 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 FAM107AO95990 144 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 T-ENOLP0DO92 83 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 NCK1P16333 377 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 GTF2E2P29084 291 aaKnown RBP14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 ADAM8P78325 824 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 ROR2Q01974 943 aaKnown RBP14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 TGFBR3Q03167 851 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 C1DQ13901 141 aaKnown RBP14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 ZNF672Q499Z4 452 aaPredicted RBP14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 ZNF627Q7L945 461 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 UEVLDQ8IX04 471 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 PGAM4Q8N0Y7 254 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 PFN4Q8NHR9 129 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 TMEM239Q8WW34 195 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 PRRC1Q96M27 445 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 HS6ST2Q96MM7 605 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 SEPHS2Q99611 448 aa14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 KCTD14Q9BQ13 255 aaPredicted RBP14.09□□□□□ -0.15
SCAMP4-205ENST00000452128 EMC6Q9BV81 110 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms