RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 LIX1LQ8IVB5 337 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 MCEMP1Q8IX19 187 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 SLC43A2Q8N370 569 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 LINC00471Q8N535 108 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 CNEP1R1Q8N9A8 125 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 ADPRHL1Q8NDY3 354 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 FANK1Q8TC84 345 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 NRBF2Q96F24 287 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 OXGR1Q96P68 337 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 DGCR6LQ9BY27 220 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 PLA2G12AQ9BZM1 189 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 UCK2Q9BZX2 261 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 MED29Q9NX70 200 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 KLHL9Q9P2J3 617 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 ERRFI1Q9UJM3 462 aaPredicted RBP10.54□□□□□ -0.72
RCL1-208ENST00000448872 MGAT4BQ9UQ53 548 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 RASD1Q9Y272 281 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 FLVCR1Q9Y5Y0 555 aa10.54□□□□□ -0.72
RCL1-208ENST00000448872 SHANK1Q9Y566 2161 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 ZNF407Q9C0G0 2248 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 IGKV3D-15A0A087WSY6 115 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 A0A1B0GUH1 482 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 HTR3EA5X5Y0 456 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 MCIDASD6RGH6 385 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 SOCS2O14508 198 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 TRAF3IP2O43734 574 aaPredicted RBP10.53□□□□□ -0.72
RCL1-208ENST00000448872 MGRN1O60291 552 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 SS18L1O75177 396 aaPredicted RBP10.53□□□□□ -0.72
RCL1-208ENST00000448872 ADAP00813 363 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 IL2RAP01589 272 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 TP53P04637 393 aaPredicted RBP10.53□□□□□ -0.72
RCL1-208ENST00000448872 YES1P07947 543 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 IFNGR1P15260 489 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 SLC9A3P48764 834 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 SLC16A1P53985 500 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 ZP4Q12836 540 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 C1DQ13901 141 aaKnown RBP10.53□□□□□ -0.72
RCL1-208ENST00000448872 MELKQ14680 651 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 CDSNQ15517 529 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 LRRC36Q1X8D7 754 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 ALG10Q5BKT4 473 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 RIPPLY2Q5TAB7 128 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 LPCAT4Q643R3 524 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 ZNF620Q6ZNG0 422 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 UEVLDQ8IX04 471 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 SVOPLQ8N434 492 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 CBR4Q8N4T8 237 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 OR8D4Q8NGM9 314 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 RND1Q92730 232 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 GMPPAQ96IJ6 420 aaPredicted RBP10.53□□□□□ -0.72
RCL1-208ENST00000448872 SAMD8Q96LT4 415 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 SLC29A1Q99808 456 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 EMC6Q9BV81 110 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 GABARAPL1Q9H0R8 117 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 C12orf49Q9H741 205 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 DCLRE1BQ9H816 532 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 BCO1Q9HAY6 547 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 KIF17Q9P2E2 1029 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 STX18Q9P2W9 335 aaKnown RBP10.53□□□□□ -0.72
RCL1-208ENST00000448872 REV1Q9UBZ9 1251 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 RNF6Q9Y252 685 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 ADAM18Q9Y3Q7 739 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 COL6A6A6NMZ7 2263 aa10.53□□□□□ -0.72
RCL1-208ENST00000448872 LOC102725191A0A1B0GVB3 256 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 EI24O14681 340 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 RNF224P0DH78 156 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 ZNF43P17038 809 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 PEX2P28328 305 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 CLDN17P56750 224 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 ERVK-25P63136 954 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 PPP2R2BQ00005 443 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 LGALS3BPQ08380 585 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 TOP3AQ13472 1001 aaPredicted RBP10.52□□□□□ -0.73
RCL1-208ENST00000448872 PDK3Q15120 406 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 POU4F3Q15319 338 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 TRIP10Q15642 601 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 CLEC12AQ5QGZ9 265 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 GTF2IRD2BQ6EKJ0 949 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 TMEM211Q6ICI0 200 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 OR2A2Q6IF42 318 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 SMARCD3Q6STE5 483 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 RASSF6Q6ZTQ3 369 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 FAM214BQ7L5A3 538 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 BTLAQ7Z6A9 289 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 PXKQ7Z7A4 578 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 GTF2IRD2Q86UP8 949 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 STARD4Q96DR4 205 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 SF3B5Q9BWJ5 86 aaKnown RBP10.52□□□□□ -0.73
RCL1-208ENST00000448872 OR52D1Q9H346 318 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 RNPEPL1Q9HAU8 725 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 FANCFQ9NPI8 374 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 INIPQ9NRY2 104 aa10.52□□□□□ -0.73
RCL1-208ENST00000448872 TMEFF2Q9UIK5 374 aaPredicted RBP10.52□□□□□ -0.73
RCL1-208ENST00000448872 ZNF724A8MTY0 619 aa10.51□□□□□ -0.73
RCL1-208ENST00000448872 ZG16O60844 167 aa10.51□□□□□ -0.73
RCL1-208ENST00000448872 NDUFB2O95178 105 aa10.51□□□□□ -0.73
RCL1-208ENST00000448872 VAMP5O95183 116 aa10.51□□□□□ -0.73
RCL1-208ENST00000448872 PPP1R3DO95685 299 aa10.51□□□□□ -0.73
RCL1-208ENST00000448872 IGHV3-9P01782 118 aa10.51□□□□□ -0.73
RCL1-208ENST00000448872 ANXA8P13928 327 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms