RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SLC2A12Q8TD20 617 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 SPSB2Q99619 263 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 UBQLN3Q9H347 655 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 BCL2L10Q9HD36 194 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 ST6GALNAC2Q9UJ37 374 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 PRKAB1Q9Y478 270 aa17.62■□□□□ 0.41
HMGA1-205ENST00000447654 SULT2B1O00204 365 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 CDX1P47902 265 aaPredicted RBP17.61■□□□□ 0.41
HMGA1-205ENST00000447654 HTRA4P83105 476 aaPredicted RBP17.61■□□□□ 0.41
HMGA1-205ENST00000447654 LSM11P83369 360 aaKnown RBP eCLIP17.61■□□□□ 0.416e-9■■■■□ 22.3
HMGA1-205ENST00000447654 SSBP1Q04837 148 aaKnown RBP17.61■□□□□ 0.41
HMGA1-205ENST00000447654 PYY3Q5JQD4 70 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 PLPP4Q5VZY2 271 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 FAAP20Q6NZ36 180 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 UNQ9370/PRO34162Q6UXP9 181 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 OR10H4Q8NGA5 316 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 PAQR8Q8TEZ7 354 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 PRDM13Q9H4Q3 707 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 SUV39H2Q9H5I1 410 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 SFXN1Q9H9B4 322 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 PARPBPQ9NWS1 579 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 CA14Q9ULX7 337 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 TIMM10BQ9Y5J6 103 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 HELZP42694 1942 aaKnown RBP17.61■□□□□ 0.41
HMGA1-205ENST00000447654 PLXNB3Q9ULL4 1909 aa17.61■□□□□ 0.41
HMGA1-205ENST00000447654 KLF4O43474 513 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 PIP5K1CO60331 668 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 IFNA17P01571 189 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 NDUFV2P19404 249 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 CPT2P23786 658 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 S100A2P29034 98 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 F2RL1P55085 397 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 B4GALNT1Q00973 533 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 ST3GAL3Q11203 375 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 FOXO1Q12778 655 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 IRF4Q15306 451 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 TMEM215Q68D42 235 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 C22orf39Q6P5X5 142 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 INO80EQ8NBZ0 244 aaPredicted RBP17.6■□□□□ 0.41
HMGA1-205ENST00000447654 OR5AP2Q8NGF4 316 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 OR4C16Q8NGL9 310 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 GCDHQ92947 438 aaPredicted RBP17.6■□□□□ 0.41
HMGA1-205ENST00000447654 MIB2Q96AX9 1013 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 C4orf36Q96KX1 117 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 ZCCHC2Q9C0B9 1178 aaKnown RBP17.6■□□□□ 0.41
HMGA1-205ENST00000447654 SLC6A16Q9GZN6 736 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 HS3ST2Q9Y278 367 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 AK6Q9Y3D8 172 aaKnown RBP17.6■□□□□ 0.41
HMGA1-205ENST00000447654 KPTNQ9Y664 436 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 METTL21EPA6NDL7 271 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 ZNF705EA8MWA4 302 aaPredicted RBP17.6■□□□□ 0.41
HMGA1-205ENST00000447654 CTNSO60931 367 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 IFNA2P01563 188 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 ADH1AP07327 375 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 RHOP08100 348 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 HLA-GP17693 338 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 SERPINA4P29622 427 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 MAS1LP35410 378 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 ACVR1BP36896 505 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 SCAND1P57086 179 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 TAS2R50P59544 299 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 NTHL1P78549 312 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 HGFACQ04756 655 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 DECR1Q16698 335 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 ZNF697Q5TEC3 545 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 Q6ZVU0 165 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 NUDCD2Q8WVJ2 157 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 SKA2Q8WVK7 121 aaPredicted RBP17.6■□□□□ 0.41
HMGA1-205ENST00000447654 SMIM19Q96E16 107 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 PIK3IP1Q96FE7 263 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 FAM46AQ96IP4 442 aaKnown RBP17.6■□□□□ 0.41
HMGA1-205ENST00000447654 CHST5Q9GZS9 411 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 DUSP15Q9H1R2 295 aaPredicted RBP17.6■□□□□ 0.41
HMGA1-205ENST00000447654 ZDHHC6Q9H6R6 413 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 MOKQ9UQ07 419 aa17.6■□□□□ 0.41
HMGA1-205ENST00000447654 CDHR4A6H8M9 788 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 ANTXRLA6NF34 631 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 IDSB3KWA1 339 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 TCAPO15273 167 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 FARS2O95363 451 aaKnown RBP17.59■□□□□ 0.41
HMGA1-205ENST00000447654 DDTP30046 118 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 TAS2R20P59543 309 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 PWWP2BQ6NUJ5 590 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 STEAP2Q8NFT2 490 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 SYNPRQ8TBG9 265 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 LYSMD1Q96S90 227 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 RHOFQ9HBH0 211 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 DUSP22Q9NRW4 184 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 CNIH4Q9P003 139 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 TAAR2Q9P1P5 351 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 ATXN7L1Q9ULK2 861 aaPredicted RBP17.59■□□□□ 0.41
HMGA1-205ENST00000447654 ITGB2P05107 769 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 SFTA3P0C7M3 94 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 AKAIN1P0CW23 69 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 RD3LP0DJH9 198 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 PAX1P15863 534 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 AVPR2P30518 371 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 MAGEB1P43366 347 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 RGS8P57771 180 aaPredicted RBP17.59■□□□□ 0.41
HMGA1-205ENST00000447654 TAS2R41P59536 307 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms