RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 OR5W2Q8NH69 310 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 DUSP19Q8WTR2 217 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 NKD1Q969G9 470 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 C3orf49Q96BT1 292 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 GPR137Q96N19 417 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 FYTTD1Q96QD9 318 aaKnown RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CCNL2Q96S94 520 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF426Q9BUY5 554 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 HPF1Q9NWY4 346 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 SPATA2Q9UM82 520 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 ICAM5Q9UMF0 924 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 RPS10-NUDT3A0A1W2PQS6 291 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CDRT15L2A8MXV6 281 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 M0R3G1 203 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 TP53I11O14683 189 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 SLC30A4O14863 429 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 TFECO14948 347 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 RRASP10301 218 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 PNMTP11086 282 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 EEF1B2P24534 225 aaKnown RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 P2RX1P51575 399 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CDK5R2Q13319 367 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 MAD2L1BPQ15013 274 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 NTRK2Q16620 822 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CTU2Q2VPK5 515 aaKnown RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CLLU1Q5K131 121 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 TMEM236Q5W0B7 351 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 UTS2BQ765I0 119 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CCDC71Q8IV32 467 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 KIAA1143Q96AT1 154 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 BPIFA2Q96DR5 249 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 ZCCHC4Q9H5U6 513 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CDCP1Q9H5V8 836 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 RANBP3Q9H6Z4 567 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 METTL7AQ9H8H3 244 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 BRD7Q9NPI1 651 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 RASSF1Q9NS23 344 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 RYDENQ9NUL5 291 aaKnown RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 KLRF1Q9NZS2 232 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 FKBP7Q9Y680 259 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 A0A087WUJ7 227 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 TMEM82A0PJX8 343 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 MEIOCA2RUB1 952 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 METTL15A6NJ78 407 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 ELOA3DA6NLF2 546 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 LOC110117498-PIK3R3F6TDL0 507 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 KLF4O43474 513 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 GMFGO60234 142 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 SERPINA7P05543 415 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 IGFBP1P08833 259 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 HLA-DMAP28067 261 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 SOX3P41225 446 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 SLC1A3P43003 542 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 SSR4P51571 173 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 BTN1A1Q13410 526 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 IL10RAQ13651 578 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CBFBQ13951 182 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 ELOA3BQ3SY89 546 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 LINC00114Q6XXX2 140 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 TMPRSS11FQ6ZWK6 438 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 TMPRSS7Q7RTY8 843 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 TMEM156Q8N614 296 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 ELOA3Q8NG57 546 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 OR10G3Q8NGC4 313 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 PFN4Q8NHR9 129 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CNIH3Q8TBE1 160 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 FBLIM1Q8WUP2 373 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 RNF138Q8WVD3 245 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 ASB15Q8WXK1 588 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 IP6K3Q96PC2 410 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 NPAS1Q99742 590 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 HDHD5Q9BXW7 423 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 MEPEQ9NQ76 525 aaPredicted RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 SLC23A1Q9UHI7 598 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 TRAPPC4Q9Y296 219 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 ARGFXA6NJG6 315 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 A8MV72 311 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 NUPL2O15504 423 aaKnown RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 GIPRP48546 466 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 MAP2K6P52564 334 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CTBP2P56545 445 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 PER3P56645 1201 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 NHLH1Q02575 133 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF791Q3KP31 576 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 SLC6A19Q695T7 634 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 IL20RBQ6UXL0 311 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CASP12Q6UXS9 341 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 DTX1Q86Y01 620 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 ENTHD1Q8IYW4 607 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 ARMC10Q8N2F6 343 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 UBE2FQ969M7 185 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CCDC32Q9BV29 185 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 DPH1Q9BZG8 443 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 ESRP2Q9H6T0 727 aaKnown RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 EGLN3Q9H6Z9 239 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 GSN-AS1Q9NRJ2 163 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 C20orf141Q9NUB4 165 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 WDR70Q9NW82 654 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 IL17BQ9UHF5 180 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CDV3Q9UKY7 258 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms