RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 GRM7Q14831 915 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 CCDC157Q569K6 752 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 LCN1P1Q5VSP4 162 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 SFXN4Q6P4A7 337 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 LEG1Q6P5S2 330 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 MARCH3Q86UD3 253 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 GDPD1Q8N9F7 314 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 PPP1R14AQ96A00 147 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 PGLYRP3Q96LB9 341 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 DPYSL5Q9BPU6 564 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 FGF21Q9NSA1 209 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 AKAP13Q12802 2813 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 CCDC163A0A0D9SF12 145 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 OPN1LWP04000 364 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 GLB1P16278 677 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 PRKACAP17612 351 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 SLC2A5P22732 501 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 AHCYP23526 432 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 MST1P26927 711 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 HOXA6P31267 233 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 MAP2K3P46734 347 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 PPP3R1P63098 170 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 GPLD1P80108 840 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 HSD11B2P80365 405 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 LTBQ06643 244 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 PON3Q15166 354 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 CDONQ4KMG0 1287 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 HES5Q5TA89 166 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 ZSCAN1Q8NBB4 408 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 ZNF563Q8TA94 476 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 TRMT10AQ8TBZ6 339 aaKnown RBP8.63□□□□□ -1.03
CUX1-206ENST00000437600 NR4A3Q92570 626 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 TRIM63Q969Q1 353 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 PMEPA1Q969W9 287 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 C3orf49Q96BT1 292 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 SGTBQ96EQ0 304 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 THAP7Q9BT49 309 aaPredicted RBP8.63□□□□□ -1.03
CUX1-206ENST00000437600 MED18Q9BUE0 208 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 ULBP3Q9BZM4 244 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 TRIM2Q9C040 744 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 PCED1AQ9H1Q7 454 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 BRD7Q9NPI1 651 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 MKKSQ9NPJ1 570 aaPredicted RBP8.63□□□□□ -1.03
CUX1-206ENST00000437600 CTSFQ9UBX1 484 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 CHRNA9Q9UGM1 479 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 DMXL2Q8TDJ6 3036 aa8.63□□□□□ -1.03
CUX1-206ENST00000437600 TMEM72A0PK05 275 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 HCRTR2O43614 444 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 NUDT21O43809 227 aaKnown RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 CPNE3O75131 537 aaKnown RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 NDUFB2O95178 105 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ATF1P18846 271 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 EDNRAP25101 427 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 SLC6A6P31641 620 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 DDOSTP39656 456 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 NR0B1P51843 470 aaKnown RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 NANOS3P60323 173 aaKnown RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 FGFBP1Q14512 234 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 QPRTQ15274 297 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 NSDHLQ15738 373 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 EID2Q8N6I1 236 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ZNF615Q8N8J6 731 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 NPEPL1Q8NDH3 523 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 DNAAF1Q8NEP3 725 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ABCG5Q9H222 651 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 NKIRAS2Q9NYR9 191 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 SPEF1Q9Y4P9 236 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 SPTBN4Q9H254 2564 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 IGKV1D-42A0A075B6H8 117 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 A0A087WUJ7 227 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ELOA3DA6NLF2 546 aaPredicted RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 MEN1O00255 615 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 PLPP2O43688 288 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 SIGLEC6O43699 453 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 TIAF1O95411 115 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 OR8G3PP0DMU2 310 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 THBS2P35442 1172 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 HTR2BP41595 481 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 GDI2P50395 445 aaKnown RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 CTXN1P60606 82 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 EGR4Q05215 589 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ASAH1Q13510 395 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ELOA3BQ3SY89 546 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ZCCHC12Q6PEW1 402 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ZNF574Q6ZN55 896 aaPredicted RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 LANCL3Q6ZV70 420 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 PLXDC1Q8IUK5 500 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 SLC38A9Q8NBW4 561 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ZBTB44Q8NCP5 570 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ELOA3Q8NG57 546 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 OR6C4Q8NGE1 309 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 NPAS1Q99742 590 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 GAL3ST1Q99999 423 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 COL25A1Q9BXS0 654 aaPredicted RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 NANSQ9NR45 359 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 STMN3Q9NZ72 180 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 MKL2Q9ULH7 1088 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ALG5Q9Y673 324 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms