RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OGG1O15527 345 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 ZNF28P17035 718 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 PSMD7P51665 324 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 E2F1Q01094 437 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 MESTQ5EB52 335 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 SLC22A16Q86VW1 577 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 GHDCQ8N2G8 530 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 PGLYRP3Q96LB9 341 aa23.27■■□□□ 1.32
CPNE1-216ENST00000437340 EXPH5Q8NEV8 1989 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 ANKRD33BA6NCL7 494 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 SELENOFO60613 162 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 SERPINI2O75830 405 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 SC5DO75845 299 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 AHSA1O95433 338 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 MSX1P28360 303 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 HCCSP53701 268 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 INSL4Q14641 139 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 CCDC58Q4VC31 144 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 LYPD8Q6UX82 237 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 RFLNBQ8N5W9 214 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 OR2T4Q8NH00 348 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 SNX18Q96RF0 628 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 SDHCQ99643 169 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-216ENST00000437340 MIXL1Q9H2W2 232 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 NCDNQ9UBB6 729 aa23.26■■□□□ 1.31
CPNE1-216ENST00000437340 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 SHISA3A0PJX4 238 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 FUOMA2VDF0 154 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 GDF9O60383 454 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 DXOO77932 396 aaKnown RBP23.25■■□□□ 1.31
CPNE1-216ENST00000437340 RENP00797 406 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 CCL4P13236 92 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 PRKCAP17252 672 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 GTF2E2P29084 291 aaKnown RBP23.25■■□□□ 1.31
CPNE1-216ENST00000437340 APOBEC1P41238 236 aaKnown RBP23.25■■□□□ 1.31
CPNE1-216ENST00000437340 CDC20Q12834 499 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 TP53I3Q53FA7 332 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 FAM198BQ6UWH4 519 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 SLC16A9Q7RTY1 509 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 FAM83FQ8NEG4 500 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-216ENST00000437340 ABHD4Q8TB40 342 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 ELP5Q8TE02 316 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 THAP4Q8WY91 577 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 PELI1Q96FA3 418 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 DEFB126Q9BYW3 111 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 INIPQ9NRY2 104 aa23.25■■□□□ 1.31
CPNE1-216ENST00000437340 ZNF346Q9UL40 294 aaKnown RBP23.25■■□□□ 1.31
CPNE1-216ENST00000437340 OTOGLQ3ZCN5 2332 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 C9J4A7 227 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 ETV2O00321 342 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-216ENST00000437340 WISP1O95388 367 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 SERPINA3P01011 423 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 FBXO45P0C2W1 286 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 BCAP31P51572 246 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 PPP3R1P63098 170 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 SIRPAP78324 504 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 SLC3A1Q07837 685 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 CDK5R1Q15078 307 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 PCOLCEQ15113 449 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 TEX19Q8NA77 164 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 MR1Q95460 341 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 SMIM19Q96E16 107 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 TMEM9BQ9NQ34 198 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 SDHAF3Q9NRP4 125 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 FAM86C1Q9NVL1 165 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 COPS3Q9UNS2 423 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 IGLV3-32A0A0A0MS00 114 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 B4E171 279 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 TSPAN7P41732 249 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 MAP2K6P52564 334 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 DEFA1P59665 94 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 DEFA3P59666 94 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 DNASE1L3Q13609 305 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 RPL22L1Q6P5R6 122 aaKnown RBP23.24■■□□□ 1.31
CPNE1-216ENST00000437340 PAMR1Q6UXH9 720 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 ZNF517Q6ZMY9 492 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-216ENST00000437340 PXKQ7Z7A4 578 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 SLC25A36Q96CQ1 311 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 PARD6AQ9NPB6 346 aa23.24■■□□□ 1.31
CPNE1-216ENST00000437340 TRIM3O75382 744 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-216ENST00000437340 PTTG1O95997 202 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 GRPRP30550 384 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 CCKBRP32239 447 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 MFSD13AQ14CX5 517 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 NTRK2Q16620 822 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 FAM199XQ6PEV8 388 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-216ENST00000437340 RPTNQ6XPR3 784 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 TPRA1Q86W33 373 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 NAXDQ8IW45 347 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 POC5Q8NA72 575 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 GHSRQ92847 366 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 MNTQ99583 582 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 ATF6BQ99941 703 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 ULBP3Q9BZM4 244 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 CPNE5Q9HCH3 593 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 GALNT9Q9HCQ5 603 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 MRPL39Q9NYK5 338 aaKnown RBP23.23■■□□□ 1.31
CPNE1-216ENST00000437340 KLRF1Q9NZS2 232 aa23.23■■□□□ 1.31
CPNE1-216ENST00000437340 C4orf47A7E2U8 309 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 OR2J2O76002 312 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms