RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 TMEM175Q9BSA9 504 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 C20orf24Q9BUV8 137 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 SLITRK2Q9H156 845 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 GAL3ST2Q9H3Q3 398 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 NHEJ1Q9H9Q4 299 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 MCCC2Q9HCC0 563 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 RAB18Q9NP72 206 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 SMOXQ9NWM0 555 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 PAK1IP1Q9NWT1 392 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 IL36GQ9NZH8 169 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 BFARQ9NZS9 450 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 OR1A1Q9P1Q5 309 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 WARS2Q9UGM6 360 aaKnown RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 APOBEC3BQ9UH17 382 aaKnown RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 KLHL21Q9UJP4 597 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 AK6Q9Y3D8 172 aaKnown RBP3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 NPTNQ9Y639 398 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 INSRP06213 1382 aa3.48□□□□□ -1.85
HMGB1P45-201ENST00000435986 IGLV8-61A0A075B6I0 122 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 PPIAL4EA0A075B759 164 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 GOLGA8QA0A0J9YX86 632 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 IQANK1A0A1B0GTG1 560 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 HAS3O00219 553 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 EFNA2O43921 213 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 CXCL13O43927 109 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 PRKYO43930 277 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 OR10H3O60404 316 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 LCA5LO95447 670 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 IGHG3P01860 377 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 LGALS2P05162 132 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 PPIAL4FP0DN26 164 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 CCL2P13500 99 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 GSTM3P21266 225 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 ZP3P21754 424 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 VDAC1P21796 283 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 CASP14P31944 242 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 EVI2BP34910 448 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 CRATP43155 626 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 PRKXP51817 358 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 STX17P56962 302 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 TSPAN5P62079 268 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 CXCL6P80162 114 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 BCL2L1Q07817 233 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 DPYSL3Q14195 570 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 LPAL2Q16609 132 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 MICBQ29980 383 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 KLHL38Q2WGJ6 581 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 SLC25A52Q3SY17 297 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 SBK1Q52WX2 424 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 TP53I3Q53FA7 332 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 C6orf226Q5I0X4 101 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 SLC25A30Q5SVS4 291 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 GPR157Q5UAW9 335 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 RSBN1Q5VWQ0 802 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 WSCD1Q658N2 575 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 OR4F3Q6IEY1 312 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 UFSP1Q6NVU6 142 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 MYPOPQ86VE0 399 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 NUDCD3Q8IVD9 361 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 OR5T3Q8NGG3 340 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 RHEBL1Q8TAI7 183 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 DTX3LQ8TDB6 740 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 SCFD1Q8WVM8 642 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 ST8SIA1Q92185 356 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 ELMO1Q92556 727 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 KIFAP3Q92845 792 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 BADQ92934 168 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 CERS2Q96G23 380 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 SERAC1Q96JX3 654 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 CYP2S1Q96SQ9 504 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 PAXXQ9BUH6 204 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 TEKT3Q9BXF9 490 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 PARD6BQ9BYG5 372 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 PRRG3Q9BZD7 231 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 RANBP3Q9H6Z4 567 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 MRPS30Q9NP92 439 aaKnown RBP3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 ZNF275Q9NSD4 429 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 NKIRAS1Q9NYS0 192 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 ZNF639Q9UID6 485 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 GGA2Q9UJY4 613 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 PITPNC1Q9UKF7 332 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 VANGL2Q9ULK5 521 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 FRMPD3Q5JV73 1810 aa3.47□□□□□ -1.85
HMGB1P45-201ENST00000435986 IGHV3-35A0A0C4DH35 117 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 LOC100131303A0A0U1RQF7 123 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 TMEM120BA0PK00 339 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 RAB19A4D1S5 217 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 TRDCB7Z8K6 153 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 H0YHG0 523 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 KDELR3O43731 214 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 SERF1AO75920 110 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 OR5F1O95221 314 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 CLDN9O95484 217 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 THY1P04216 161 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 SERPIND1P05546 499 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 RPSAP08865 295 aaKnown RBP3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 NCK1P16333 377 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 COX5AP20674 150 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 MMP11P24347 488 aa3.46□□□□□ -1.86
HMGB1P45-201ENST00000435986 GNA11P29992 359 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms