RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 SLC38A4Q969I6 547 aa12.48□□□□□ -0.41
LINC01006-204ENST00000435354 OR2M2Q96R28 347 aa12.48□□□□□ -0.41
LINC01006-204ENST00000435354 CPPED1Q9BRF8 314 aaPredicted RBP12.48□□□□□ -0.41
LINC01006-204ENST00000435354 GPR35Q9HC97 309 aa12.48□□□□□ -0.41
LINC01006-204ENST00000435354 CUBNO60494 3623 aa12.48□□□□□ -0.41
LINC01006-204ENST00000435354 VWC2LB2RUY7 222 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 SLC43A1O75387 559 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 IGKV3-15P01624 115 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 CSF3P09919 207 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 IGHV4-31P0DP07 118 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
LINC01006-204ENST00000435354 CBLP22681 906 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 PPIBP23284 216 aaKnown RBP12.47□□□□□ -0.41
LINC01006-204ENST00000435354 PAX7P23759 505 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 AQP1P29972 269 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 ATP4BP51164 291 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 SNRPD2P62316 118 aaKnown RBP12.47□□□□□ -0.41
LINC01006-204ENST00000435354 HGFACQ04756 655 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 C1DQ13901 141 aaKnown RBP12.47□□□□□ -0.41
LINC01006-204ENST00000435354 SCARB2Q14108 478 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 AGKQ53H12 422 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 TTMPQ5BVD1 217 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 PHYHD1Q5SRE7 291 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 FAM91A1Q658Y4 838 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 ULK3Q6PHR2 472 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 DLEU7Q6UYE1 221 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 NHLRC1Q6VVB1 395 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 H1FNTQ75WM6 255 aaPredicted RBP12.47□□□□□ -0.41
LINC01006-204ENST00000435354 WDFY1Q8IWB7 410 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 ANKS4BQ8N8V4 417 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 ADPRHL1Q8NDY3 354 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 SPATA3Q8NHX4 192 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 PROX1Q92786 737 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 SLC41A3Q96GZ6 507 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 KCNS3Q9BQ31 491 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 TMEM38AQ9H6F2 299 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 CRLF2Q9HC73 371 aa12.47□□□□□ -0.41
LINC01006-204ENST00000435354 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.47□□□□□ -0.41
LINC01006-204ENST00000435354 TESQ9UGI8 421 aaKnown RBP12.47□□□□□ -0.41
LINC01006-204ENST00000435354 A0A087WUJ7 227 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 A0A0B4J2E0 115 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 A0A1B0GX12 115 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 MS4A18H0YCH9 400 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 BGLAPP02818 100 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 OR4A8P0C604 315 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 HLA-DOBP13765 273 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 CBR1P16152 277 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 USF1P22415 310 aaPredicted RBP12.46□□□□□ -0.41
LINC01006-204ENST00000435354 RGS8P57771 180 aaPredicted RBP12.46□□□□□ -0.41
LINC01006-204ENST00000435354 EFNB3Q15768 340 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 CEACAM16Q2WEN9 425 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 MS4A18Q3C1V0 323 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 CHRFAM7AQ494W8 412 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 VHLLQ6RSH7 139 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 SLC46A3Q7Z3Q1 461 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 NET1Q7Z628 596 aaPredicted RBP12.46□□□□□ -0.41
LINC01006-204ENST00000435354 PTOV1Q86YD1 416 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 SLC47A1Q96FL8 570 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 ATP6V1G3Q96LB4 118 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 MOGAT1Q96PD6 335 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 SPATA5L1Q9BVQ7 753 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 PLK3Q9H4B4 646 aa12.46□□□□□ -0.41
LINC01006-204ENST00000435354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC01006-204ENST00000435354 PRORSD1PA6NEY8 169 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 B9A039 149 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 SEC14L2O76054 403 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 PDE5AO76074 875 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 MFN2O95140 757 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 ZNF16P17020 682 aaPredicted RBP12.45□□□□□ -0.42
LINC01006-204ENST00000435354 SLC6A2P23975 617 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 PDLIM4P50479 330 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 IDH3GP51553 393 aaPredicted RBP12.45□□□□□ -0.42
LINC01006-204ENST00000435354 CDH12P55289 794 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 PCBP3P57721 371 aaKnown RBP12.45□□□□□ -0.42
LINC01006-204ENST00000435354 IL1RL1Q01638 556 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 SQLEQ14534 574 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 OR1Q1Q15612 314 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 CYB5R2Q6BCY4 276 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 PODNL1Q6PEZ8 512 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 ARMC8Q8IUR7 673 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 C20orf196Q8IYI0 205 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 HIPK4Q8NE63 616 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 PIK3C3Q8NEB9 887 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 NUP37Q8NFH4 326 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 OR4F15Q8NGB8 312 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 OR6S1Q8NH40 331 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 ZNF607Q96SK3 696 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 VRK1Q99986 396 aaPredicted RBP12.45□□□□□ -0.42
LINC01006-204ENST00000435354 MOV10Q9HCE1 1003 aaKnown RBP12.45□□□□□ -0.42
LINC01006-204ENST00000435354 CORO2BQ9UQ03 480 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 CORINQ9Y5Q5 1042 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 FKBP7Q9Y680 259 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 FBN3Q75N90 2809 aa12.45□□□□□ -0.42
LINC01006-204ENST00000435354 IGHV2OR16-5A0A0B4J2B6 119 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 ZNF99A8MXY4 864 aaPredicted RBP12.44□□□□□ -0.42
LINC01006-204ENST00000435354 EVPLLA8MZ36 301 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 LRRN3E7EW58 273 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 M0R3G1 203 aa12.44□□□□□ -0.42
LINC01006-204ENST00000435354 FAM157CP0CG43 387 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms