RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 LRRC75AQ8NAA5 344 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 TMEM178AQ8NBL3 297 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 FAM83FQ8NEG4 500 aaPredicted RBP10.13□□□□□ -0.79
LINC00539-203ENST00000434601 TSPAN14Q8NG11 270 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 OR5J2Q8NH18 312 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 OR14L1PQ8NHC6 308 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 MOSPD2Q8NHP6 518 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 MFSD8Q8NHS3 518 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF417Q8TAU3 575 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 SLC25A36Q96CQ1 311 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 ARL5BQ96KC2 179 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF587Q96SQ5 575 aaPredicted RBP10.13□□□□□ -0.79
LINC00539-203ENST00000434601 TAPBPLQ9BX59 468 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 TTTY12Q9BZ98 90 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 TMEM185BQ9H7F4 350 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 CMC2Q9NRP2 79 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 SCN3BQ9NY72 215 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 MRPL39Q9NYK5 338 aaKnown RBP10.13□□□□□ -0.79
LINC00539-203ENST00000434601 DNAJC27Q9NZQ0 273 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 SLC6A5Q9Y345 797 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 TPRKBQ9Y3C4 175 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 MRPS18CQ9Y3D5 142 aaKnown RBP10.13□□□□□ -0.79
LINC00539-203ENST00000434601 HDGFL3Q9Y3E1 203 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 NCKAP5O14513 1909 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 A0A087WXM4 84 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 LIPT2A6NK58 231 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 GJE1A6NN92 205 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 RIIAD1A6NNX1 92 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 KDM4EB2RXH2 506 aaPredicted RBP10.12□□□□□ -0.79
LINC00539-203ENST00000434601 BLOC1S5-TXNDC5H3BN57 136 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 TLX2O43763 284 aaPredicted RBP10.12□□□□□ -0.79
LINC00539-203ENST00000434601 XPNPEP2O43895 674 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 TRAPPC6AO75865 159 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 SLC2A10O95528 541 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 CLDN1O95832 211 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 IFNGP01579 166 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 CD14P08571 375 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 RFPL3SP0C7P2 107 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 IMPDH2P12268 514 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF3P17036 446 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 EEF1B2P24534 225 aaKnown RBP10.12□□□□□ -0.79
LINC00539-203ENST00000434601 SHC1P29353 583 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 SFTPDP35247 375 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 NUDT6P53370 316 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 CDH15P55291 814 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 B3GALT5-AS1P59052 145 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 PLGLB1Q02325 96 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 PMS2P3Q13401 168 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 SLC25A30Q5SVS4 291 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 MEDAGQ5VYS4 303 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 YRDCQ86U90 279 aaKnown RBP10.12□□□□□ -0.79
LINC00539-203ENST00000434601 ST6GALNAC3Q8NDV1 305 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 IPCEF1Q8WWN9 437 aaPredicted RBP10.12□□□□□ -0.79
LINC00539-203ENST00000434601 RELTQ969Z4 430 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 LRR1Q96L50 414 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 SFXN2Q96NB2 322 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 ERMAPQ96PL5 475 aaPredicted RBP10.12□□□□□ -0.79
LINC00539-203ENST00000434601 OR5B2Q96R09 309 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 KATNB1Q9BVA0 655 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 FN3KQ9H479 309 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 CHST11Q9NPF2 352 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 PLCXD1Q9NUJ7 323 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 SEC14L4Q9UDX3 406 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 GPR52Q9Y2T5 361 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 MYO7BQ6PIF6 2116 aa10.12□□□□□ -0.79
LINC00539-203ENST00000434601 TRIM64CA6NLI5 447 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ACOT7O00154 380 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ARPC3O15145 178 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ENTPD6O75354 484 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 GLSO94925 669 aaPredicted RBP10.11□□□□□ -0.79
LINC00539-203ENST00000434601 OR6A2O95222 327 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 HPNP05981 417 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ADORA3P0DMS8 318 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 APEHP13798 732 aaKnown RBP10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ATP6V1B1P15313 513 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 NOS3P29474 1203 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 RFC3P40938 356 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 OR2B6P58173 313 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 CTXN1P60606 82 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 RAC1P63000 192 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ERVK-25P63136 954 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 TUBA4AP68366 448 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 SLC35A2P78381 396 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF91Q05481 1191 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 HYAL4Q2M3T9 481 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 TMEM176BQ3YBM2 270 aaPredicted RBP10.11□□□□□ -0.79
LINC00539-203ENST00000434601 WIPI1Q5MNZ9 446 aaPredicted RBP10.11□□□□□ -0.79
LINC00539-203ENST00000434601 SLC35F1Q5T1Q4 408 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF787Q6DD87 383 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF773Q6PK81 442 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 CXXC5Q7LFL8 322 aaKnown RBP10.11□□□□□ -0.79
LINC00539-203ENST00000434601 TMEM251Q8N6I4 163 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ZFP62Q8NB50 900 aaPredicted RBP10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF540Q8NDQ6 660 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ADPRHL1Q8NDY3 354 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 SMPDL3BQ92485 455 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 KLHL15Q96M94 604 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF582Q96NG8 517 aaPredicted RBP10.11□□□□□ -0.79
LINC00539-203ENST00000434601 DUSP21Q9H596 190 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 CCNB1IP1Q9NPC3 277 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms