RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 IFITM5A6NNB3 132 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 LMO7DNF2Z398 122 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 TO15178 435 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 CDC40O60508 579 aaKnown RBP eCLIP9.49□□□□□ -0.89
CD44-210ENST00000434472 OR2B3O76000 313 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 RAF1P04049 648 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 CD3GP09693 182 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 H2AFB2P0C5Z0 115 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 SRFP11831 508 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 PGCP20142 388 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 CXCR1P25024 350 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 TACR3P29371 465 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 IL12BP29460 328 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 MNDAP41218 407 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 GFERP55789 205 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 SCAND1P57086 179 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 DGCR2P98153 550 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 EGR3Q06889 387 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 KLF9Q13886 244 aaPredicted RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 Q499Y3 187 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 BCL2L15Q5TBC7 163 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 LRRN1Q6UXK5 716 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 UTS2BQ765I0 119 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 ZPLD1Q8TCW7 415 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 DEDD2Q8WXF8 326 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 DAZLQ92904 295 aaKnown RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 PDCD1LG2Q9BQ51 273 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 OR8D2Q9GZM6 311 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 COMMD4Q9H0A8 199 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 OR51J1Q9H342 316 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 RANBP3Q9H6Z4 567 aaPredicted RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 WDR76Q9H967 626 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 LMAN1LQ9HAT1 526 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 TCF7L1Q9HCS4 588 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 MRPS7Q9Y2R9 242 aaKnown RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 TMEM184BQ9Y519 407 aaPredicted RBP9.49□□□□□ -0.89
CD44-210ENST00000434472 ETV7Q9Y603 341 aa9.49□□□□□ -0.89
CD44-210ENST00000434472 TRAV36DV7A0A075B6V5 113 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 TRBV5-5A0A0J9YX44 114 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 A0A1B0GVI7 797 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 A0A1B0GVT2 93 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 TRABD2BA6NFA1 517 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 OR2W5A6NFC9 320 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 OR6C76A6NM76 312 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 A8MUA0 341 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 GABARAPH6UMI1 98 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 PIN1P1O15428 100 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 PRAF2O60831 178 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 ZNF780AO75290 641 aaPredicted RBP9.48□□□□□ -0.89
CD44-210ENST00000434472 SERPINI2O75830 405 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 MT-ATP6P00846 226 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 IGKV3-11P04433 115 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 ANXA3P12429 323 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 GP1BBP13224 206 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 DPP4P27487 766 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 SRP9P49458 86 aaKnown RBP9.48□□□□□ -0.89
CD44-210ENST00000434472 BLVRAP53004 296 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 LTBQ06643 244 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 RPL18Q07020 188 aaKnown RBP9.48□□□□□ -0.89
CD44-210ENST00000434472 SNTB2Q13425 540 aaKnown RBP9.48□□□□□ -0.89
CD44-210ENST00000434472 FCN2Q15485 313 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 BTBD16Q32M84 506 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 GXYLT1Q4G148 440 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 EEF1A1P5Q5VTE0 462 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 YOD1Q5VVQ6 348 aaPredicted RBP9.48□□□□□ -0.89
CD44-210ENST00000434472 TTLL10Q6ZVT0 673 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 MAMDC2Q7Z304 686 aaPredicted RBP9.48□□□□□ -0.89
CD44-210ENST00000434472 LSRQ86X29 649 aaPredicted RBP9.48□□□□□ -0.89
CD44-210ENST00000434472 TIGD4Q8IY51 512 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 CMTM4Q8IZR5 234 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 OR4D9Q8NGE8 314 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 OR56B4Q8NH76 319 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 ZNF721Q8TF20 911 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 RLN3Q8WXF3 142 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 ADIPOR1Q96A54 375 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 CLIP3Q96DZ5 547 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 S100A16Q96FQ6 103 aaKnown RBP9.48□□□□□ -0.89
CD44-210ENST00000434472 MOGAT1Q96PD6 335 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 TSPAN32Q96QS1 320 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 LMF1Q96S06 567 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 LPAR4Q99677 370 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 TPSD1Q9BZJ3 242 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 SRA1Q9HD15 236 aaKnown RBP9.48□□□□□ -0.89
CD44-210ENST00000434472 NUDT15Q9NV35 164 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 C2orf42Q9NWW7 574 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 UCKL1Q9NWZ5 548 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 KLHL9Q9P2J3 617 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 LAMP5Q9UJQ1 280 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 CLEC4AQ9UMR7 237 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 SLCO1B1Q9Y6L6 691 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 RNF215Q9Y6U7 377 aa9.48□□□□□ -0.89
CD44-210ENST00000434472 TRAV6A0A075B6T7 132 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 TCRBV16S1A1N1A0A5B0 115 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 TMEM72A0PK05 275 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ANKRD34BA5PLL1 514 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ACOD1A6NK06 481 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 UPK3AO75631 287 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 KRT33AO76009 404 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ALX3O95076 343 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ZFPL1O95159 310 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms