RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 NUP58Q9BVL2 599 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 CHMP4BQ9H444 224 aaKnown RBP4.4□□□□□ -1.71
USP54-206ENST00000433394 ZNF518AQ6AHZ1 1483 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 MBD5Q9P267 1494 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 SAMD9LQ8IVG5 1584 aa4.4□□□□□ -1.71
USP54-206ENST00000433394 ABCC5O15440 1437 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 NCOA1Q15788 1441 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 ATP10AO60312 1499 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 MBTPS2O43462 519 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 SOX15O60248 233 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 KLK2P20151 261 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 TBPP20226 339 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 ZBTB25P24278 435 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 COX7A1P24310 79 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 OPRD1P41143 372 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 HLCSP50747 726 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 IDI1Q13907 227 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 CARD16Q5EG05 197 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 CARD17Q5XLA6 110 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 SPINK14Q6IE38 97 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 METAP1DQ6UB28 335 aaPredicted RBP4.39□□□□□ -1.71
USP54-206ENST00000433394 TMIGD1Q6UXZ0 262 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 TTC5Q8N0Z6 440 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 OR2L5Q8NG80 312 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 OR52I1Q8NGK6 324 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 UCN3Q969E3 161 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 TM4SF19Q96DZ7 209 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 PANX2Q96RD6 677 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 ARHGDIGQ99819 225 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 P2RY13Q9BPV8 354 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 MFFQ9GZY8 342 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 ILKAPQ9H0C8 392 aaPredicted RBP4.39□□□□□ -1.71
USP54-206ENST00000433394 RANBP3Q9H6Z4 567 aaPredicted RBP4.39□□□□□ -1.71
USP54-206ENST00000433394 IL26Q9NPH9 171 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 RAB20Q9NX57 234 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 B4GALT7Q9UBV7 327 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 NUP50Q9UKX7 468 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 DIP2BQ9P265 1576 aa4.39□□□□□ -1.71
USP54-206ENST00000433394 NAIPQ13075 1403 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 C9orf84Q5VXU9 1444 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 ERBINQ96RT1 1412 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 COL2A1P02458 1487 aaPredicted RBP4.38□□□□□ -1.71
USP54-206ENST00000433394 MAGI2Q86UL8 1455 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 DUOX2Q9NRD8 1548 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 FAM135AQ9P2D6 1515 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 A6NIZ1 184 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 ZFP92A6NM28 416 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 E7ENQ6 273 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 HSD17B6O14756 317 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 IGKV3-15P01624 115 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 IGHV3-48P01763 117 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 EIF2S2P20042 333 aaKnown RBP4.38□□□□□ -1.71
USP54-206ENST00000433394 YAP1P46937 504 aaKnown RBP4.38□□□□□ -1.71
USP54-206ENST00000433394 RAP1BP61224 184 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 KCNJ2P63252 427 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 DGUOKQ16854 277 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 HSP90AB3PQ58FF7 597 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 FHL5Q5TD97 284 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 RAET1LQ5VY80 246 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 UQCC3Q6UW78 93 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 RDH10Q8IZV5 341 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 OR10G3Q8NGC4 313 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 OR1L6Q8NGR2 347 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 CMTM7Q96FZ5 175 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 C16orf74Q96GX8 76 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 HSFY1Q96LI6 401 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 GLRX2Q9NS18 164 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 AIG1Q9NVV5 245 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 GIN1Q9NXP7 522 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 HOXC10Q9NYD6 342 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 SLC7A8Q9UHI5 535 aa4.38□□□□□ -1.71
USP54-206ENST00000433394 EIF2AK4Q9P2K8 1649 aaKnown RBP4.38□□□□□ -1.71
USP54-206ENST00000433394 ADGRL1O94910 1474 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 MLH3Q9UHC1 1453 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 SYCP2Q9BX26 1530 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 KDM5CP41229 1560 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 A0A075B6Q4 140 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 C9JVG2 144 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 AGPAT2O15120 278 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 HCRTR1O43613 425 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 MMP23AO75900 390 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 LY6G6DO95868 133 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 KRT14P02533 472 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 SERPIND1P05546 499 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 C2P06681 752 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 CCNCP24863 283 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 KLK7P49862 253 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 TAS2R19P59542 299 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 BEX3Q00994 111 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 NSDHLQ15738 373 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 ATP6AP1Q15904 470 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 BCL7AQ4VC05 210 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 SCARA5Q6ZMJ2 495 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 FAM220AQ7Z4H9 259 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 TPRX1Q8N7U7 411 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 ZNF740Q8NDX6 193 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 SETD7Q8WTS6 366 aaKnown RBP4.37□□□□□ -1.71
USP54-206ENST00000433394 ROGDIQ9GZN7 287 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 TMEM9Q9P0T7 183 aa4.37□□□□□ -1.71
USP54-206ENST00000433394 KIF25Q9UIL4 384 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms