RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CBX1P83916 185 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 PLOD1Q02809 727 aaPredicted RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 ORC2Q13416 577 aaPredicted RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 TRIP10Q15642 601 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 RAB11BQ15907 218 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 SSX2Q16385 188 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 DNAL1Q4LDG9 190 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 SBK1Q52WX2 424 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 AGKQ53H12 422 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 EOGTQ5NDL2 527 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 GPR157Q5UAW9 335 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 RAET1LQ5VY80 246 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 CTRB2Q6GPI1 263 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 PRR5LQ6MZQ0 368 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 LINC00523Q86TU6 105 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 VSTM4Q8IW00 320 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 MKXQ8IYA7 352 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 ZNF786Q8N393 782 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 Q8N9L7 120 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 TTC29Q8NA56 475 aaPredicted RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 OR4D6Q8NGJ1 314 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 GLYATL2Q8WU03 294 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 MARC2Q969Z3 335 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 TMA16Q96EY4 203 aaKnown RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 GPR137Q96N19 417 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 CHRDL1Q9BU40 450 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 FICDQ9BVA6 458 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 TEKT3Q9BXF9 490 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 FTHL17Q9BXU8 183 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 NLNQ9BYT8 704 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 TRIM4Q9C037 500 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 DRC3Q9H069 523 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 ZNF160Q9HCG1 818 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 ZNF302Q9NR11 478 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 MRPL22Q9NWU5 206 aaKnown RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 RHBDL2Q9NX52 303 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 NKIRAS1Q9NYS0 192 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 RBAKQ9NYW8 714 aaPredicted RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 SEC14L3Q9UDX4 400 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 ADAM28Q9UKQ2 775 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 VANGL2Q9ULK5 521 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 RPH3ALQ9UNE2 315 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 CHMP2BQ9UQN3 213 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 MAPK8IP3Q9UPT6 1336 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 SCRIBQ14160 1630 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 ARHGAP21Q5T5U3 1957 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 FHAD1B1AJZ9 1412 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 TRBV7-9A0A0J9YWB2 115 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 A0A1B0GUH1 482 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 METTL21EPA6NDL7 271 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 ANKRD30BLA7E2S9 258 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 PDZK1P1A8MUH7 402 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 A8MUI8 341 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 B4DXG7 233 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 PGRMC1O00264 195 aaKnown RBP2.16□□□□□ -2.06
CLK1-204ENST00000432425 TOR1AO14656 332 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 ARPC1BO15143 372 aaKnown RBP2.16□□□□□ -2.06
CLK1-204ENST00000432425 ARPC3O15145 178 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 DUX1O43812 170 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 HCN1O60741 890 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 NSA2O95478 260 aaKnown RBP2.16□□□□□ -2.06
CLK1-204ENST00000432425 IFNA14P01570 189 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 IL6P05231 212 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 PSMB6P28072 239 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 IL12BP29460 328 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 GTF2H1P32780 548 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 CHI3L1P36222 383 aaPredicted RBP2.16□□□□□ -2.06
CLK1-204ENST00000432425 CSNK1DP48730 415 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 SERPINB9P50453 376 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 TPMTP51580 245 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 EFNA3P52797 238 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 RAG2P55895 527 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 PSMC5P62195 406 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 STX5Q13190 355 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 IL18R1Q13478 541 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 DGCR6Q14129 220 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 ALX1Q15699 326 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 CARTPTQ16568 116 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 LINC01620Q4KN68 170 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 CMPK2Q5EBM0 449 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 PDZK1Q5T2W1 519 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 LIPNQ5VXI9 398 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 UQCC3Q6UW78 93 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 HSDL2Q6YN16 418 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 TMEM179BQ7Z7N9 219 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 RANBP3LQ86VV4 465 aaPredicted RBP2.16□□□□□ -2.06
CLK1-204ENST00000432425 RBM45Q8IUH3 476 aaKnown RBP2.16□□□□□ -2.06
CLK1-204ENST00000432425 FAM58AQ8N1B3 248 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 TBC1D19Q8N5T2 526 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 CEP112Q8N8E3 955 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 CYB561A3Q8NBI2 242 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 OR4F17Q8NGA8 305 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 KCNG3Q8TAE7 436 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 PNPT1Q8TCS8 783 aaKnown RBP2.16□□□□□ -2.06
CLK1-204ENST00000432425 PIGCQ92535 297 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 P3H4Q92791 437 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 PLEKHA8Q96JA3 519 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 OR4F4Q96R69 305 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 RIT2Q99578 217 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 NAT9Q9BTE0 207 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms