RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 UEVLDQ8IX04 471 aa13.21□□□□□ -0.29
HERC3-206ENST00000431413 ADPRHL1Q8NDY3 354 aa13.21□□□□□ -0.29
HERC3-206ENST00000431413 HIPK4Q8NE63 616 aa13.21□□□□□ -0.29
HERC3-206ENST00000431413 OR4F15Q8NGB8 312 aa13.21□□□□□ -0.29
HERC3-206ENST00000431413 OR6S1Q8NH40 331 aa13.21□□□□□ -0.29
HERC3-206ENST00000431413 ASPNQ9BXN1 380 aa13.21□□□□□ -0.29
HERC3-206ENST00000431413 SLC52A3Q9NQ40 469 aa13.21□□□□□ -0.29
HERC3-206ENST00000431413 CA10Q9NS85 328 aa13.21□□□□□ -0.29
HERC3-206ENST00000431413 INTS9Q9NV88 658 aaKnown RBP13.21□□□□□ -0.29
HERC3-206ENST00000431413 CRNNQ9UBG3 495 aaPredicted RBP13.21□□□□□ -0.29
HERC3-206ENST00000431413 TRIM33Q9UPN9 1127 aa13.21□□□□□ -0.29
HERC3-206ENST00000431413 ALPK2Q86TB3 2170 aa13.21□□□□□ -0.3
HERC3-206ENST00000431413 A0A087WUJ7 227 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 TRBV5-3A0A0A0MS03 114 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 NDUFS8O00217 210 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 GPRIN2O60269 458 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 TPST1O60507 370 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 CBR1P16152 277 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 HTR2AP28223 471 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 ARR3P36575 388 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 VLDLRP98155 873 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 RBBP4Q09028 425 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
HERC3-206ENST00000431413 PODNL1Q6PEZ8 512 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 LINGO2Q7L985 606 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 SLC46A3Q7Z3Q1 461 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 SNX32Q86XE0 403 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 C11orf65Q8NCR3 313 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 IL17RDQ8NFM7 739 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 C10orf105Q8TEF2 133 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 MDFIQ99750 246 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 CRLF2Q9HC73 371 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 GPR35Q9HC97 309 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 MYOZ1Q9NP98 299 aaPredicted RBP13.2□□□□□ -0.3
HERC3-206ENST00000431413 B3GAT2Q9NPZ5 323 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 B3GAT1Q9P2W7 334 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 SEC14L4Q9UDX3 406 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 LEF1Q9UJU2 399 aaPredicted RBP13.2□□□□□ -0.3
HERC3-206ENST00000431413 NDUFAF1Q9Y375 327 aa13.2□□□□□ -0.3
HERC3-206ENST00000431413 IGKV1D-42A0A075B6H8 117 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 A0A0B4J2E0 115 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 A0A1B0GX12 115 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 ANGPT2O15123 496 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 IGKV3-15P01624 115 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 IGLV1-44P01699 117 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
HERC3-206ENST00000431413 VIMP08670 466 aaKnown RBP13.19□□□□□ -0.3
HERC3-206ENST00000431413 CECR9P0C854 216 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 USF1P22415 310 aaPredicted RBP13.19□□□□□ -0.3
HERC3-206ENST00000431413 CBLP22681 906 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 AQP1P29972 269 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 CAPZA2P47755 286 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 PDLIM4P50479 330 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 TUBA1BP68363 451 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 TUBA4AP68366 448 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 PMS2P3Q13401 168 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 OR1Q1Q15612 314 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 CYP51A1Q16850 503 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 CEACAM16Q2WEN9 425 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 C6orf52Q5T4I8 152 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 TUBA1AQ71U36 451 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 C10orf53Q8N6V4 93 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 SCAIQ8N9R8 606 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 STON2Q8WXE9 905 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 OR2M2Q96R28 347 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 VRK1Q99986 396 aaPredicted RBP13.19□□□□□ -0.3
HERC3-206ENST00000431413 KLHL14Q9P2G3 628 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 NOX1Q9Y5S8 564 aa13.19□□□□□ -0.3
HERC3-206ENST00000431413 A0A096LNT2 108 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 ZNF99A8MXY4 864 aaPredicted RBP13.18□□□□□ -0.3
HERC3-206ENST00000431413 HMGB1P1B2RPK0 211 aaPredicted RBP13.18□□□□□ -0.3
HERC3-206ENST00000431413 M0R3G1 203 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 TRAF3IP2O43734 574 aaPredicted RBP13.18□□□□□ -0.3
HERC3-206ENST00000431413 FMO6PO60774 539 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 MFN2O95140 757 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 OR4A8P0C604 315 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 EFNB3Q15768 340 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 MST1LQ2TV78 715 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 RUNDC3AQ59EK9 446 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 TTMPQ5BVD1 217 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 CYB5R2Q6BCY4 276 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 VHLLQ6RSH7 139 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 DLEU7Q6UYE1 221 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 DHDDSQ86SQ9 333 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 SLC30A8Q8IWU4 369 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 C10orf111Q8N326 155 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 NUP37Q8NFH4 326 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 SPATA3Q8NHX4 192 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 SLC41A3Q96GZ6 507 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 LRR1Q96L50 414 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 PIMREGQ9BSJ6 248 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 TMEM43Q9BTV4 400 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 PRR14Q9BWN1 585 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 RAB1BQ9H0U4 201 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 NELFAQ9H3P2 528 aa13.18□□□□□ -0.3
HERC3-206ENST00000431413 IKZF5Q9H5V7 419 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms