RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 FAM157BP0CG42 384 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 NKX2-5P52952 324 aaPredicted RBP12.44□□□□□ -0.42
THBS3-202ENST00000428962 RPS11P62280 158 aaKnown RBP eCLIP12.44□□□□□ -0.42
THBS3-202ENST00000428962 TATDN3Q17R31 274 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 VWA2Q5GFL6 755 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 BICRALQ6AI39 1079 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 UNQ9370/PRO34162Q6UXP9 181 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 TRIM63Q969Q1 353 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 TSPAN32Q96QS1 320 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 MARVELD1Q9BSK0 173 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 VN1R1Q9GZP7 353 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 DUSP15Q9H1R2 295 aaPredicted RBP12.44□□□□□ -0.42
THBS3-202ENST00000428962 FGF21Q9NSA1 209 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 N6AMT1Q9Y5N5 214 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 HSPB2A8KAH6 182 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 A8MU76 341 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 PHYHO14832 338 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 TOX3O15405 576 aaPredicted RBP12.44□□□□□ -0.42
THBS3-202ENST00000428962 ITGA10O75578 1167 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 UBL3O95164 117 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 NUDT14O95848 222 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 F13BP05160 661 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 MAPK3P27361 379 aaPredicted RBP12.44□□□□□ -0.42
THBS3-202ENST00000428962 PSMB10P40306 273 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 ARRB1P49407 418 aaPredicted RBP12.44□□□□□ -0.42
THBS3-202ENST00000428962 HSPB2Q16082 182 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 PRAMEF17Q5VTA0 474 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 C1orf189Q5VU69 101 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 MAMDC2Q7Z304 686 aaPredicted RBP12.44□□□□□ -0.42
THBS3-202ENST00000428962 MARCH3Q86UD3 253 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 CAPSLQ8WWF8 208 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 TAAR8Q969N4 342 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 ZNF501Q96CX3 271 aaPredicted RBP12.44□□□□□ -0.42
THBS3-202ENST00000428962 PDCD1LG2Q9BQ51 273 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 SLX1AQ9BQ83 275 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 NRSN2Q9GZP1 204 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 BRD7Q9NPI1 651 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 NLKQ9UBE8 527 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 SPATA2Q9UM82 520 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 TMEM14AQ9Y6G1 99 aa12.44□□□□□ -0.42
THBS3-202ENST00000428962 A0A0B4J293 547 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 A0A1B0GTQ1 180 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 PAHP00439 452 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 BGLAPP02818 100 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 ATF1P18846 271 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 ABCD3P28288 659 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 GRPRP30550 384 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 P2RX1P51575 399 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 POLR2HP52434 150 aaKnown RBP12.43□□□□□ -0.42
THBS3-202ENST00000428962 MRPS15P82914 257 aaKnown RBP12.43□□□□□ -0.42
THBS3-202ENST00000428962 LTBQ06643 244 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 CCDC92Q53HC0 331 aaPredicted RBP12.43□□□□□ -0.42
THBS3-202ENST00000428962 MESTQ5EB52 335 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 UBE2NLQ5JXB2 153 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 ZNF684Q5T5D7 378 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 MISPQ8IVT2 679 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 PRSS58Q8IYP2 241 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 SLC25A45Q8N413 288 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 ZNF441Q8N8Z8 693 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 PLPP5Q8NEB5 264 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 ZNF671Q8TAW3 534 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 RNF31Q96EP0 1072 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 ADAD1Q96M93 576 aaKnown RBP12.43□□□□□ -0.42
THBS3-202ENST00000428962 KLHL15Q96M94 604 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 MRI1Q9BV20 369 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 SLC7A5P2Q9GIP4 190 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 NUFIP1Q9UHK0 495 aaKnown RBP12.43□□□□□ -0.42
THBS3-202ENST00000428962 KNL1Q8NG31 2342 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 SPAG17Q6Q759 2223 aa12.43□□□□□ -0.42
THBS3-202ENST00000428962 A0A1W2PPK0 400 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 CDC14CA4D256 554 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 FAM171A2A8MVW0 826 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 XKRYO14609 159 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 ZNF432O94892 652 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 AHCYP23526 432 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 EVI2BP34910 448 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 CXCL12P48061 93 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 EFNA3P52797 238 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 CEP78Q5JTW2 689 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 TIGD3Q6B0B8 471 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 LYPD4Q6UWN0 246 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 C5orf46Q6UWT4 87 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 CDC20BQ86Y33 519 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 TIGD4Q8IY51 512 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 YIPF7Q8N8F6 280 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 ZNF511Q8NB15 262 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 ADAMTS14Q8WXS8 1223 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 CLDN23Q96B33 292 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 UPRTQ96BW1 309 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 LRFN3Q9BTN0 628 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 TGIF2Q9GZN2 237 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 SLITRK2Q9H156 845 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 ABCG5Q9H222 651 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 WDR76Q9H967 626 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 NOX4Q9NPH5 578 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 LAMP5Q9UJQ1 280 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 ALG5Q9Y673 324 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 CACNG2Q9Y698 323 aa12.42□□□□□ -0.42
THBS3-202ENST00000428962 PCDH15Q96QU1 1955 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms