RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 MAGEE2Q8TD90 523 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-209ENST00000428728 ZNF317Q96PQ6 595 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-209ENST00000428728 KCNK17Q96T54 332 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 CCDC28BQ9BUN5 200 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 SPATA5L1Q9BVQ7 753 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 GPR35Q9HC97 309 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 SELENONQ9NZV5 590 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 KLHL14Q9P2G3 628 aa14.85□□□□□ -0.03
TRIM39-209ENST00000428728 CRNNQ9UBG3 495 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-209ENST00000428728 TESQ9UGI8 421 aaKnown RBP14.85□□□□□ -0.03
TRIM39-209ENST00000428728 RNF212BA8MTL3 300 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 TRAF3IP2O43734 574 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-209ENST00000428728 AKAP8O43823 692 aaKnown RBP14.84□□□□□ -0.03
TRIM39-209ENST00000428728 FZD7O75084 574 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 TGDSO95455 350 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 IGLV1-44P01699 117 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 OR4A8P0C604 315 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 IGHV4-31P0DP07 118 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 USF1P22415 310 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-209ENST00000428728 SERPINF1P36955 418 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 CAPZA2P47755 286 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 NPRL3Q12980 569 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 ADIPOQQ15848 244 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 CARD17Q5XLA6 110 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 DNAJA4Q8WW22 397 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-209ENST00000428728 DYDC1Q8WWB3 177 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 PROX1Q92786 737 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 ZNF837Q96EG3 531 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-209ENST00000428728 OR2M2Q96R28 347 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 PIMREGQ9BSJ6 248 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 REPIN1Q9BWE0 567 aaKnown RBP14.84□□□□□ -0.03
TRIM39-209ENST00000428728 CRLF2Q9HC73 371 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 SLC13A4Q9UKG4 626 aa14.84□□□□□ -0.03
TRIM39-209ENST00000428728 CUBNO60494 3623 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 TRBV5-3A0A0A0MS03 114 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 ZNF503-AS2A6NEH8 195 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 RPL36A-HNRNPH2H7BZ11 118 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 HPRP00739 348 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 PAX7P23759 505 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 SLC6A2P23975 617 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 C3orf36Q3SXR2 165 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 CYB5R2Q6BCY4 276 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 ULK3Q6PHR2 472 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 H1FNTQ75WM6 255 aaPredicted RBP14.83□□□□□ -0.04
TRIM39-209ENST00000428728 UEVLDQ8IX04 471 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 TMEM123Q8N131 208 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 PIK3C3Q8NEB9 887 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 SPATA3Q8NHX4 192 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 SLC47A1Q96FL8 570 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 ZNF607Q96SK3 696 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 CPPED1Q9BRF8 314 aaPredicted RBP14.83□□□□□ -0.04
TRIM39-209ENST00000428728 TMEM38AQ9H6F2 299 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 SLC52A3Q9NQ40 469 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 CDC42EP3Q9UKI2 254 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 CORO2BQ9UQ03 480 aa14.83□□□□□ -0.04
TRIM39-209ENST00000428728 DNHD1Q96M86 4753 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 ATRQ13535 2644 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.82□□□□□ -0.049e-7■■■■■ 39.9
TRIM39-209ENST00000428728 PRORSD1PA6NEY8 169 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 EVPLLA8MZ36 301 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 B9A039 149 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 M0R3G1 203 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 PDE5AO76074 875 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 IGKV3-15P01624 115 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 BGLAPP02818 100 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 FAM157CP0CG43 387 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 HLA-DOBP13765 273 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 LSM11P83369 360 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRIM39-209ENST00000428728 POU3F1Q03052 451 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-209ENST00000428728 SQLEQ14534 574 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 OR1Q1Q15612 314 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 PHYHD1Q5SRE7 291 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 FAM91A1Q658Y4 838 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 MDP1Q86V88 176 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 ARMC8Q8IUR7 673 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 C10orf53Q8N6V4 93 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 ADPRHL1Q8NDY3 354 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 HIPK4Q8NE63 616 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 OR4F15Q8NGB8 312 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 THOC1Q96FV9 657 aaKnown RBP14.82□□□□□ -0.04
TRIM39-209ENST00000428728 MOGAT1Q96PD6 335 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 EPYCQ99645 322 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 WFDC6Q9BQY6 131 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 EMC6Q9BV81 110 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 ASPNQ9BXN1 380 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 TMEM27Q9HBJ8 222 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 MOV10Q9HCE1 1003 aaKnown RBP14.82□□□□□ -0.04
TRIM39-209ENST00000428728 ANGPT4Q9Y264 503 aa14.82□□□□□ -0.04
TRIM39-209ENST00000428728 FBN1P35555 2871 aaKnown RBP14.82□□□□□ -0.04
TRIM39-209ENST00000428728 A0A087WUJ7 227 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 IGHV2OR16-5A0A0B4J2B6 119 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 A0A0B4J2E0 115 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 A0A1B0GX12 115 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 ZNF99A8MXY4 864 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-209ENST00000428728 VWC2LB2RUY7 222 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 LRRN3E7EW58 273 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 hCG_2039718K7EN88 272 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 M0R3H8 397 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 SERPINI2O75830 405 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 OPN1SWP03999 348 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms