RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 BCL2L2Q92843 193 aaPredicted RBP13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 FBXO17Q96EF6 278 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 ZNF587Q96SQ5 575 aaPredicted RBP13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 SIKE1Q9BRV8 207 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 MRGBPQ9NV56 204 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 INTS9Q9NV88 658 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 VAPAQ9P0L0 249 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 CDC42EP3Q9UKI2 254 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 CR1P17927 2039 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 A0A087WUJ7 227 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 HMGB1P1B2RPK0 211 aaPredicted RBP13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 ANGPT2O15123 496 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 UPK3AO75631 287 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 IGLV1-44P01699 117 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 C8BP07358 591 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 GRPRP30550 384 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 ARR3P36575 388 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 SERPINF1P36955 418 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 VLDLRP98155 873 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 HOXC5Q00444 222 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 NAAAQ02083 359 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 CYP51A1Q16850 503 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 SWI5Q1ZZU3 235 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 TMEM249Q2WGJ8 235 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 PAGE3Q5JUK9 113 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 SLC46A3Q7Z3Q1 461 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 ZNF525Q8N782 197 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 ZNF540Q8NDQ6 660 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 C10orf105Q8TEF2 133 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 TSPEARQ8WU66 669 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 NANOS1Q8WY41 292 aaKnown RBP13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 LRR1Q96L50 414 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 EBF4Q9BQW3 602 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 PIMREGQ9BSJ6 248 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 TMEM43Q9BTV4 400 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 KLHL14Q9P2G3 628 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 LPAR3Q9UBY5 353 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 USP22Q9UPT9 525 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 NDUFAF1Q9Y375 327 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 NOX1Q9Y5S8 564 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 ALPK2Q86TB3 2170 aa13.48□□□□□ -0.25
CTDSP1-202ENST00000428361 A0A096LPE4 126 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 TRBV5-3A0A0A0MS03 114 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 A0A1W2PPZ6 126 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 KIAA1324LA8MWY0 1029 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 ZNF99A8MXY4 864 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 FMO6PO60774 539 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 ZNF432O94892 652 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 MT-ATP6P00846 226 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 IGKV3-15P01624 115 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 CBR1P16152 277 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 USF1P22415 310 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 HTR2AP28223 471 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 GZMKP49863 264 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 EFNB3Q15768 340 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 C6orf52Q5T4I8 152 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 INTS11Q5TA45 600 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 ZNF613Q6PF04 617 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 MSRB3Q8IXL7 192 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 KDM8Q8N371 416 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 NUP37Q8NFH4 326 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 RASSF5Q8WWW0 418 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 TAAR8Q969N4 342 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 ANKRD27Q96NW4 1050 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 RAB1BQ9H0U4 201 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 ZNF442Q9H7R0 627 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 GPR35Q9HC97 309 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 ARGLU1Q9NWB6 273 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 TMEM160Q9NX00 188 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 SLAMF8Q9P0V8 285 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 B3GAT1Q9P2W7 334 aa13.47□□□□□ -0.25
CTDSP1-202ENST00000428361 A0A0B4J2E0 115 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 A0A1B0GX12 115 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 ZNF726A6NNF4 738 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 CECR9P0C854 216 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 PPOXP50336 477 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 ARF1P84077 181 aaKnown RBP13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 PUDPQ08623 228 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 PMS2P3Q13401 168 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 OR1Q1Q15612 314 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 CEACAM16Q2WEN9 425 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 CYB5R2Q6BCY4 276 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 DHDDSQ86SQ9 333 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 C10orf53Q8N6V4 93 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 SPATA3Q8NHX4 192 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 SLC41A3Q96GZ6 507 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 MAGEB18Q96M61 343 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 CPPED1Q9BRF8 314 aaPredicted RBP13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 DENND2DQ9H6A0 471 aaPredicted RBP13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 CRLF2Q9HC73 371 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 MRPL39Q9NYK5 338 aaKnown RBP13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 FBXL3Q9UKT7 428 aa13.46□□□□□ -0.25
CTDSP1-202ENST00000428361 IGKV1D-42A0A075B6H8 117 aa13.45□□□□□ -0.26
CTDSP1-202ENST00000428361 A0A096LNT2 108 aa13.45□□□□□ -0.26
CTDSP1-202ENST00000428361 LOC390937A0A1W2PQ73 354 aa13.45□□□□□ -0.26
CTDSP1-202ENST00000428361 TRAF3IP2O43734 574 aaPredicted RBP13.45□□□□□ -0.26
CTDSP1-202ENST00000428361 OR6A2O95222 327 aa13.45□□□□□ -0.26
CTDSP1-202ENST00000428361 OR4A8P0C604 315 aa13.45□□□□□ -0.26
CTDSP1-202ENST00000428361 AQP1P29972 269 aa13.45□□□□□ -0.26
CTDSP1-202ENST00000428361 CAPZA2P47755 286 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms