RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 HS3ST1O14792 307 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 TRAF3IP2O43734 574 aaPredicted RBP8.04□□□□□ -1.12
SMC1A-203ENST00000428014 AKR7A3O95154 331 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 LYPD3O95274 346 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 FAM107AO95990 144 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 WNT11O96014 354 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 MT-ND1P03886 318 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 ASAH2BP0C7U1 165 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 HSD17B1P14061 328 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 NTF4P34130 210 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 RNF144AP50876 292 aaPredicted RBP8.04□□□□□ -1.12
SMC1A-203ENST00000428014 SLC7A2P52569 658 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 ST3GAL3Q11203 375 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 KEAP1Q14145 624 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 CAPRIN1Q14444 709 aaKnown RBP8.04□□□□□ -1.12
SMC1A-203ENST00000428014 KRT72Q14CN4 511 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 PPA1Q15181 289 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF74Q16587 644 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 EXOC3L2Q2M3D2 409 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 ENTPD8Q5MY95 495 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 FBXW10Q5XX13 1052 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 TTC33Q6PID6 262 aaPredicted RBP8.04□□□□□ -1.12
SMC1A-203ENST00000428014 CASP12Q6UXS9 341 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 CBLL1Q75N03 491 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 OFCC1Q8IZS5 231 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 IL17RDQ8NFM7 739 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 OR5J2Q8NH18 312 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 GEMIN6Q8WXD5 167 aaKnown RBP8.04□□□□□ -1.12
SMC1A-203ENST00000428014 TAAR8Q969N4 342 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 RCN3Q96D15 328 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 PRRC1Q96M27 445 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 SEPHS2Q99611 448 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 ELAC2Q9BQ52 826 aaKnown RBP8.04□□□□□ -1.12
SMC1A-203ENST00000428014 SLC7A10Q9NS82 523 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF701Q9NV72 531 aaPredicted RBP8.04□□□□□ -1.12
SMC1A-203ENST00000428014 FAIMQ9NVQ4 179 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 CMTM6Q9NX76 183 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 CRNNQ9UBG3 495 aaPredicted RBP8.04□□□□□ -1.12
SMC1A-203ENST00000428014 UPB1Q9UBR1 384 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 RNF115Q9Y4L5 304 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 MED13LQ71F56 2210 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 A0A1W2PPR1 153 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF587BE7ETH6 402 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 M0R082 166 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 PLPP3O14495 311 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ARHGEF9O43307 516 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 RAMP1O60894 148 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 SHOX2O60902 331 aaPredicted RBP8.03□□□□□ -1.12
SMC1A-203ENST00000428014 SLC43A1O75387 559 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 PDE5AO76074 875 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 CD3EP07766 207 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ITGA5P08648 1049 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 AQP1P29972 269 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 GRPRP30550 384 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 HOXC12P31275 282 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 RPS5P46782 204 aaKnown RBP8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF133P52736 654 aaPredicted RBP8.03□□□□□ -1.12
SMC1A-203ENST00000428014 PRPS1P60891 318 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 POU3F1Q03052 451 aaPredicted RBP8.03□□□□□ -1.12
SMC1A-203ENST00000428014 BNIP2Q12982 314 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 CYBRD1Q53TN4 286 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 TSPO2Q5TGU0 170 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF544Q6NX49 715 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ANKRD16Q6P6B7 361 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF704Q6ZNC4 412 aaPredicted RBP8.03□□□□□ -1.12
SMC1A-203ENST00000428014 C22orf34Q6ZV56 151 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 HMGN2P46Q86SG4 172 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 DTX2Q86UW9 622 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 CARM1Q86X55 608 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 TREML1Q86YW5 311 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 LURAP1LQ8IV03 231 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 PGAM4Q8N0Y7 254 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 TMEM123Q8N131 208 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 SMYD1Q8NB12 490 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 OR6X1Q8NH79 312 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF417Q8TAU3 575 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF385AQ96PM9 386 aaKnown RBP8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF587Q96SQ5 575 aaPredicted RBP8.03□□□□□ -1.12
SMC1A-203ENST00000428014 PRSS27Q9BQR3 290 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 WACQ9BTA9 647 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 MUC13Q9H3R2 512 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 CXorf56Q9H5V9 222 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 SMURF2Q9HAU4 748 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 NANSQ9NR45 359 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 SLC17A5Q9NRA2 495 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 ARMCX1Q9P291 453 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 PRSS50Q9UI38 385 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 RPS6KA6Q9UK32 745 aa8.03□□□□□ -1.12
SMC1A-203ENST00000428014 SAMD4AQ9UPU9 718 aaKnown RBP8.03□□□□□ -1.12
SMC1A-203ENST00000428014 A0A1W2PRQ8 180 aa8.02□□□□□ -1.13
SMC1A-203ENST00000428014 CIB4A0PJX0 185 aa8.02□□□□□ -1.13
SMC1A-203ENST00000428014 MS4A18H0YCH9 400 aa8.02□□□□□ -1.13
SMC1A-203ENST00000428014 OVOL3O00110 214 aa8.02□□□□□ -1.13
SMC1A-203ENST00000428014 NME4O00746 187 aa8.02□□□□□ -1.13
SMC1A-203ENST00000428014 AHCYL1O43865 530 aa8.02□□□□□ -1.13
SMC1A-203ENST00000428014 IGKV3-15P01624 115 aa8.02□□□□□ -1.13
SMC1A-203ENST00000428014 IGLV1-44P01699 117 aa8.02□□□□□ -1.13
SMC1A-203ENST00000428014 THY1P04216 161 aa8.02□□□□□ -1.13
SMC1A-203ENST00000428014 IFNW1P05000 195 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms