RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 VBP1P61758 197 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 AIMP2Q13155 320 aaKnown RBP13.69□□□□□ -0.22
ACTB-204ENST00000425660 SELENBP1Q13228 472 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 KRR1Q13601 381 aaKnown RBP13.69□□□□□ -0.22
ACTB-204ENST00000425660 PON3Q15166 354 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 LEG1Q6P5S2 330 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 JAZF1Q86VZ6 243 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 PHC2Q8IXK0 858 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 BEST3Q8N1M1 668 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ARIH2OSQ8N7S6 290 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 OR1J4Q8NGS1 313 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 SNX18Q96RF0 628 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ASB6Q9NWX5 421 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 TEKT2Q9UIF3 430 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
ACTB-204ENST00000425660 CAB39Q9Y376 341 aaPredicted RBP13.69□□□□□ -0.22
ACTB-204ENST00000425660 CELSR3Q9NYQ7 3312 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 CPAMD8Q8IZJ3 1885 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 RNF13O43567 381 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 GFRA3O60609 400 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 CBR3O75828 277 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 BCL10O95999 233 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 NCS1P62166 190 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ACTC1P68032 377 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ACTA1P68133 377 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 TPBGQ13641 420 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 GALEQ14376 348 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 LINC01590Q5TEZ4 76 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 LCN1P1Q5VSP4 162 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ZNF322Q6U7Q0 402 aaPredicted RBP13.69□□□□□ -0.22
ACTB-204ENST00000425660 H1FNTQ75WM6 255 aaPredicted RBP13.69□□□□□ -0.22
ACTB-204ENST00000425660 TMPRSS7Q7RTY8 843 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ADCK1Q86TW2 530 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 KLHL36Q8N4N3 616 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ZNF519Q8TB69 540 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ZFAND2BQ8WV99 257 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 NXPE2Q96DL1 559 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 DNAJA3Q96EY1 480 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 FER1L6-AS2Q96M78 137 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 GNRHR2Q96P88 292 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 TXNIPQ9H3M7 391 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 SACM1LQ9NTJ5 587 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ALKBH4Q9NXW9 302 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 STMN3Q9NZ72 180 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 MOKQ9UQ07 419 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 B3GALT5Q9Y2C3 310 aa13.69□□□□□ -0.22
ACTB-204ENST00000425660 ASPMQ8IZT6 3477 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 H3BML4 177 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 OR6A2O95222 327 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 P04436 131 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 AHCYP23526 432 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 DPP4P27487 766 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 CD79BP40259 229 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 PEX19P40855 299 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 RPL27P61353 136 aaKnown RBP13.68□□□□□ -0.22
ACTB-204ENST00000425660 BDH1Q02338 343 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 PUDPQ08623 228 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 MYBPHQ13203 477 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 OR7A5Q15622 319 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 ACKR1Q16570 336 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 GDPGP1Q6ZNW5 385 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 TMEM99Q8N816 258 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 NDNFQ8TB73 568 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 ZNRF4Q8WWF5 429 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 GATAD2BQ8WXI9 593 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 KIAA1143Q96AT1 154 aaPredicted RBP13.68□□□□□ -0.22
ACTB-204ENST00000425660 OR51E2Q9H255 320 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 ANKRD10Q9NXR5 420 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 CEP250Q9BV73 2442 aa13.68□□□□□ -0.22
ACTB-204ENST00000425660 C11orf98E9PRG8 122 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 MS4A18H0YCH9 400 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 CDK2AP1O14519 115 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 ZIC3O60481 467 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 GLCEO94923 617 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 LIPCP11150 499 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 ZNF17P17021 662 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 PSMA1P25786 263 aaKnown RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 UGT2B10P36537 528 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 LSM3P62310 102 aaKnown RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 FOXK1P85037 733 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 MS4A18Q3C1V0 323 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 TMPRSS11AQ6ZMR5 421 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 ADPRHL1Q8NDY3 354 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 DYNC2LI1Q8TCX1 351 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 SMPDL3BQ92485 455 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 ZMYND19Q96E35 227 aaPredicted RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 CNN2Q99439 309 aaKnown RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 ALG8Q9BVK2 526 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 TIMMDC1Q9NPL8 285 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 RPRD1BQ9NQG5 326 aaKnown RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 HDGFL3Q9Y3E1 203 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 PCDHGB7Q9Y5F8 929 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 NOX1Q9Y5S8 564 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 CNOT1A5YKK6 2376 aaKnown RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 A0A1W2PNV4 684 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 DAPL1A0PJW8 107 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 AKAP8O43823 692 aaKnown RBP13.67□□□□□ -0.22
ACTB-204ENST00000425660 SERPINI2O75830 405 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 TFP02787 698 aa13.67□□□□□ -0.22
ACTB-204ENST00000425660 MRPL3P09001 348 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms