RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 NCDNQ9UBB6 729 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 H7C1C5 153 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 CCL3P10147 92 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 AHCYP23526 432 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 LCN6P62502 163 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 CHAF1BQ13112 559 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 VASNQ6EMK4 673 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 SLC35F2Q8IXU6 374 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 DND1Q8IYX4 353 aaKnown RBP23.91■■□□□ 1.42
LDB1-202ENST00000425280 TMEM156Q8N614 296 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 OR4K17Q8NGC6 315 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 ALG12Q9BV10 488 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 MMP27Q9H306 513 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 AKIP1Q9NQ31 210 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 ZMIZ1Q9ULJ6 1067 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 NOX1Q9Y5S8 564 aa23.91■■□□□ 1.42
LDB1-202ENST00000425280 FAM171A2A8MVW0 826 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 MT-ND5P03915 603 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 OR2T7P0C7T2 308 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 TGM1P22735 817 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 FABP5Q01469 135 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 CD200R1LQ6Q8B3 271 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 LYPD4Q6UWN0 246 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 GLRX5Q86SX6 157 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 OR2T27Q8NH04 317 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 MFSD8Q8NHS3 518 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 BORCS5Q969J3 196 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 ANGPTL4Q9BY76 406 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 RERGLQ9H628 205 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 P4HTMQ9NXG6 502 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 SIRT4Q9Y6E7 314 aaPredicted RBP23.9■■□□□ 1.42
LDB1-202ENST00000425280 A3GALT2U3KPV4 340 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 OTOGLQ3ZCN5 2332 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 SELENOFO60613 162 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 PLGP00747 810 aaPredicted RBP23.9■■□□□ 1.42
LDB1-202ENST00000425280 MAP2K6P52564 334 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.9■■□□□ 1.428e-12■□□□□ 10
LDB1-202ENST00000425280 CRTC2Q53ET0 693 aaPredicted RBP23.9■■□□□ 1.42
LDB1-202ENST00000425280 C22orf42Q6IC83 251 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 ARIH2OSQ8N7S6 290 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 NLGN4YQ8NFZ3 816 aaPredicted RBP23.9■■□□□ 1.42
LDB1-202ENST00000425280 PAQR8Q8TEZ7 354 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 NTNG2Q96CW9 530 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 C4orf36Q96KX1 117 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 CORINQ9Y5Q5 1042 aa23.9■■□□□ 1.42
LDB1-202ENST00000425280 DCTN6O00399 190 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 TERTO14746 1132 aaKnown RBP23.89■■□□□ 1.41
LDB1-202ENST00000425280 OR6A2O95222 327 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 TCEA1P23193 301 aaKnown RBP23.89■■□□□ 1.41
LDB1-202ENST00000425280 IDUAP35475 653 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 DLSTP36957 453 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 RPS19P39019 145 aaKnown RBP23.89■■□□□ 1.41
LDB1-202ENST00000425280 OR12D2P58182 307 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 TCF15Q12870 199 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 OR7A5Q15622 319 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 ACKR1Q16570 336 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 PROK2Q9HC23 129 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 TRIM36Q9NQ86 728 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 HPF1Q9NWY4 346 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 MOKQ9UQ07 419 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 PCDHGB7Q9Y5F8 929 aa23.89■■□□□ 1.41
LDB1-202ENST00000425280 J3QLW9 94 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 LRP3O75074 770 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 RENP00797 406 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 IMPDH2P12268 514 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 ZNF19P17023 458 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 RPL27P61353 136 aaKnown RBP23.88■■□□□ 1.41
LDB1-202ENST00000425280 FOXK1P85037 733 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 ZNF468Q5VIY5 522 aaPredicted RBP23.88■■□□□ 1.41
LDB1-202ENST00000425280 PLCZ1Q86YW0 608 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 GPALPP1Q8IXQ4 340 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 ZNF519Q8TB69 540 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 TMED9Q9BVK6 235 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 GPR87Q9BY21 358 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 POTEKPQ9BYX7 375 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 TXNIPQ9H3M7 391 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 PTGES2Q9H7Z7 377 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 SRA1Q9HD15 236 aaKnown RBP23.88■■□□□ 1.41
LDB1-202ENST00000425280 C21orf140B9A014 251 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 E9PI62 339 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 H3BML4 177 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 ARHGEF9O43307 516 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 TNFSF15O95150 251 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 TFPIP10646 304 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 GPR50Q13585 617 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 MFSD13AQ14CX5 517 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 SLC22A10Q63ZE4 541 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 VASH1Q7L8A9 365 aaPredicted RBP23.88■■□□□ 1.41
LDB1-202ENST00000425280 OR5M1Q8NGP8 315 aa23.88■■□□□ 1.41
LDB1-202ENST00000425280 TRDV1A0A1B0GX56 115 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 CLDN25C9JDP6 229 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 FAM47E-STBD1D6RA91 191 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 J3QRK9 145 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 IGHMP01871 453 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 SOX6P35712 828 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 ACVR1BP36896 505 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 STPG1Q5TH74 334 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 H3F3CQ6NXT2 135 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 OR6V1Q8N148 313 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 ZNF511Q8NB15 262 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms