RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 STEAP4Q687X5 459 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 SLC35E4Q6ICL7 350 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 KLC3Q6P597 504 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 FRRS1Q6ZNA5 592 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 C1orf122Q6ZSJ8 110 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF551Q7Z340 670 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-203ENST00000424270 ISCA2Q86U28 154 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 POU5F2Q8N7G0 328 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 SDR9C7Q8NEX9 313 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 OR4F6Q8NGB9 312 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 OR4C13Q8NGP0 309 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 OR2T6Q8NHC8 308 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 ZFP28Q8NHY6 868 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 DCAKDQ8WVC6 231 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 RAB40AQ8WXH6 277 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 CDKL2Q92772 493 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 CCDC126Q96EE4 140 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 CLPTM1LQ96KA5 538 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 ATOH8Q96SQ7 321 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 RHOXF2Q9BQY4 288 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 NUDT16L1Q9BRJ7 211 aaKnown RBP5.29□□□□□ -1.56
SDCBP-203ENST00000424270 SF3B5Q9BWJ5 86 aaKnown RBP5.29□□□□□ -1.56
SDCBP-203ENST00000424270 TAPBPLQ9BX59 468 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 CDH20Q9HBT6 801 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 ACER3Q9NUN7 267 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 LRCH1Q9Y2L9 728 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 SIGLEC9Q9Y336 463 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 CAPN6Q9Y6Q1 641 aa5.29□□□□□ -1.56
SDCBP-203ENST00000424270 DYNC2H1Q8NCM8 4307 aaKnown RBP5.29□□□□□ -1.56
SDCBP-203ENST00000424270 DSPPQ9NZW4 1301 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF503-AS2A6NEH8 195 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 PDPK1O15530 556 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 RAD51CO43502 376 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 MGRN1O60291 552 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 SLC43A1O75387 559 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 TSPAN9O75954 239 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 OTCP00480 354 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 KRT6AP02538 564 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 KRT6BP04259 564 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 GPIP06744 558 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF35P13682 527 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF14P17017 642 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 TSPAN8P19075 237 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 RPL4P36578 427 aaKnown RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 IER3P46695 156 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 GIPRP48546 466 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 KRT6CP48668 564 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 CLK1P49759 484 aaKnown RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 ATP12AP54707 1039 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 KRTAP10-11P60412 298 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 BTG1P62324 171 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF763Q0D2J5 394 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 CEACAM7Q14002 265 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 RASA2Q15283 850 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 FAM83EQ2M2I3 478 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 CEACAM16Q2WEN9 425 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 ARHGAP11BQ3KRB8 267 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 SPDYE7PQ495Y7 208 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 ARSJQ5FYB0 599 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 FAM209AQ5JX71 171 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 DCST2Q5T1A1 773 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 PDZK1Q5T2W1 519 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 CAVIN1Q6NZI2 390 aaKnown RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 C11orf88Q6PI97 169 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 CCDC137Q6PK04 289 aaKnown RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 LINGO2Q7L985 606 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 GRINAQ7Z429 371 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 CTAGE3PQ8IX95 158 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 PDZD9Q8IXQ8 264 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 MUC20Q8N307 709 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 TMEM99Q8N816 258 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 PTGR2Q8N8N7 351 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 ADAMTS15Q8TE58 950 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 GEMIN6Q8WXD5 167 aaKnown RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 PMM1Q92871 262 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 ZNF524Q96C55 264 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 PHF21BQ96EK2 531 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 UBXN10Q96LJ8 280 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 C3orf30Q96M34 536 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 NELFAQ9H3P2 528 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 VPREB3Q9UKI3 123 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 PCDHGB4Q9UN71 923 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 FAF1Q9UNN5 650 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 TRAPPC4Q9Y296 219 aa5.28□□□□□ -1.56
SDCBP-203ENST00000424270 TMA7Q9Y2S6 64 aaKnown RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 POLR3KQ9Y2Y1 108 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-203ENST00000424270 TMED7-TICAM2A0A0A6YYA0 188 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 A0A0U1RQK1 487 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CCDC189A1A4V9 331 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 A8MXK9 166 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 M0R3G1 203 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 TNFRSF13BO14836 293 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 TOX4O94842 621 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 UBOX5O94941 541 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 ZFPL1O95159 310 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 DUS4LO95620 317 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CLIC3O95833 236 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 PAHP00439 452 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 IGHV1-46P01743 117 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms