RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 A8MXE2 369 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 EFCAB9A8MZ26 197 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 BLOC1S5-TXNDC5H3BN57 136 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 GPR171O14626 319 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 VAMP5O95183 116 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 OR6A2O95222 327 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 CLDN1O95832 211 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 CST1P01037 141 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 IGF2P01344 180 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 ADORA3P0DMS8 318 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 HLA-DOBP13765 273 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 AHCYP23526 432 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 GPR4P46093 362 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 OMPP47874 163 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 HMGA2P52926 109 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 ACTR3P61158 418 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 C1DQ13901 141 aaKnown RBP8.23□□□□□ -1.09
PDGFC-202ENST00000422544 KPNB1Q14974 876 aaKnown RBP8.23□□□□□ -1.09
PDGFC-202ENST00000422544 LAPTM4AQ15012 233 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 EXOC3L2Q2M3D2 409 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 SLC25A35Q3KQZ1 300 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 OR2T5Q6IEZ7 315 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 CREB3L2Q70SY1 520 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.23□□□□□ -1.09
PDGFC-202ENST00000422544 GALNT5Q7Z7M9 940 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 EPHX4Q8IUS5 362 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 CDK20Q8IZL9 346 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 ZIC4Q8N9L1 334 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 ADPRHL1Q8NDY3 354 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 OR4K5Q8NGD3 323 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 OR4C15Q8NGM1 316 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 OR2T29Q8NH02 315 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 LIPHQ8WWY8 451 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
PDGFC-202ENST00000422544 OXGR1Q96P68 337 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF385AQ96PM9 386 aaKnown RBP8.23□□□□□ -1.09
PDGFC-202ENST00000422544 RAB3IPQ96QF0 476 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-202ENST00000422544 TACO1Q9BSH4 297 aaKnown RBP8.23□□□□□ -1.09
PDGFC-202ENST00000422544 YY1AP1Q9H869 796 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 REEP1Q9H902 201 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 TAS2R5Q9NYW4 299 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 JKAMPQ9P055 326 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 EMC3Q9P0I2 261 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 B3GAT1Q9P2W7 334 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 TMCC3Q9ULS5 477 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 NOSIPQ9Y314 301 aaKnown RBP8.23□□□□□ -1.09
PDGFC-202ENST00000422544 FLVCR1Q9Y5Y0 555 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 LYVE1Q9Y5Y7 322 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 U3KQV3 271 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 PHF3Q92576 2039 aaKnown RBP8.23□□□□□ -1.09
PDGFC-202ENST00000422544 DOCK7Q96N67 2140 aa8.23□□□□□ -1.09
PDGFC-202ENST00000422544 LOC102725191A0A1B0GVB3 256 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 HTR3EA5X5Y0 456 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 ERICH4A6NGS2 130 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 ANKRD65E5RJM6 399 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 C11orf98E9PRG8 122 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 GNGT2O14610 69 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 CDC42EP2O14613 210 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 MSTNO14793 375 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 RNF13O43567 381 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 OR10H3O60404 316 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 MRPL33O75394 65 aaKnown RBP8.22□□□□□ -1.09
PDGFC-202ENST00000422544 TIPRLO75663 272 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 SERPINI2O75830 405 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 SAGP10523 405 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-202ENST00000422544 CD8BP10966 210 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF43P17038 809 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 HOXB6P17509 224 aaKnown RBP8.22□□□□□ -1.09
PDGFC-202ENST00000422544 EDNRAP25101 427 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 GRNP28799 593 aaKnown RBP8.22□□□□□ -1.09
PDGFC-202ENST00000422544 AQP2P41181 271 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 LIMS1P48059 325 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 IST1P53990 364 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 CLDN17P56750 224 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 TFF3Q07654 80 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 PUDPQ08623 228 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 ZP4Q12836 540 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 POU4F3Q15319 338 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF474Q6S9Z5 364 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-202ENST00000422544 TMPRSS11FQ6ZWK6 438 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 AAED1Q7RTV5 226 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 NANOGNBQ7Z5D8 188 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 ZER1Q7Z7L7 766 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 OAFQ86UD1 273 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 MED12LQ86YW9 2145 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 UEVLDQ8IX04 471 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 ZNF100Q8IYN0 542 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 OR13C2Q8NGS9 318 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 OR51A7Q8NH64 312 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 MOSPD2Q8NHP6 518 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 TXNDC15Q96J42 360 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 TNFRSF13CQ96RJ3 184 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 GPA33Q99795 319 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 RBM24Q9BX46 236 aaKnown RBP8.22□□□□□ -1.09
PDGFC-202ENST00000422544 DENND2DQ9H6A0 471 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-202ENST00000422544 PRSS50Q9UI38 385 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 SAMHD1Q9Y3Z3 626 aaKnown RBP8.22□□□□□ -1.09
PDGFC-202ENST00000422544 AP4S1Q9Y587 144 aa8.22□□□□□ -1.09
PDGFC-202ENST00000422544 NCOA6Q14686 2063 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-202ENST00000422544 TRAV27A0A087WT01 109 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms