RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ZNF440Q8IYI8 595 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 RDH10Q8IZV5 341 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 TSPAN10Q9H1Z9 355 aaPredicted RBP9.96□□□□□ -0.82
DDX56-203ENST00000421223 UCK1Q9HA47 277 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 BOLA1Q9Y3E2 137 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 MMACHCQ9Y4U1 282 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 FITM1A5D6W6 292 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 LANCL1O43813 399 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 DOK2O60496 412 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 OR6A2O95222 327 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 TIAF1O95411 115 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 GP1BBP13224 206 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 PRKCAP17252 672 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 MAP2K3P46734 347 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 MTNR1BP49286 362 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 NRG3P56975 720 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 POU4F2Q12837 409 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 SF3B4Q15427 424 aaKnown RBP eCLIP9.96□□□□□ -0.822e-8■■■■■ 30.5
DDX56-203ENST00000421223 HBMQ6B0K9 141 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 ZNF544Q6NX49 715 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 SLC35D2Q76EJ3 337 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 BPHLQ86WA6 291 aaPredicted RBP9.96□□□□□ -0.82
DDX56-203ENST00000421223 PM20D2Q8IYS1 436 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 OR6F1Q8NGZ6 308 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 SUN5Q8TC36 379 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 ADIPOR1Q96A54 375 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 ZNF486Q96H40 463 aaPredicted RBP9.96□□□□□ -0.82
DDX56-203ENST00000421223 PGLYRP3Q96LB9 341 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 WWTR1Q9GZV5 400 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 MOV10Q9HCE1 1003 aaKnown RBP9.96□□□□□ -0.82
DDX56-203ENST00000421223 INPP5EQ9NRR6 644 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 ZNF221Q9UK13 617 aa9.96□□□□□ -0.82
DDX56-203ENST00000421223 COL4A2P08572 1712 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 FRG2CA6NGY1 282 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 IGKV3-11P04433 115 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 HEXBP07686 556 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 CD3GP09693 182 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 PRKAR1AP10644 381 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 FOSL2P15408 326 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 TAS2R43P59537 309 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 PHF19Q5T6S3 580 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 BICRALQ6AI39 1079 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 D2HGDHQ8N465 521 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 GPR119Q8TDV5 335 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 METTL21AQ8WXB1 218 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 ATOH1Q92858 354 aaPredicted RBP9.95□□□□□ -0.82
DDX56-203ENST00000421223 FRMD6Q96NE9 622 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 OR1F2PQ96R84 312 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 TTYH2Q9BSA4 534 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 ULBP3Q9BZM4 244 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 PPP1R3EQ9H7J1 279 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 WDR76Q9H967 626 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 GALNT9Q9HCQ5 603 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 NOX4Q9NPH5 578 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 MRPL15Q9P015 296 aaKnown RBP9.95□□□□□ -0.82
DDX56-203ENST00000421223 WNT16Q9UBV4 365 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 PCDHGB7Q9Y5F8 929 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 TCRBV16S1A1N1A0A5B0 115 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 PRR32B1ATL7 298 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 B4DXG7 233 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 XKRYO14609 159 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 FLRT2O43155 660 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 LYRM1O43325 122 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 PDGFBP01127 241 aaPredicted RBP9.95□□□□□ -0.82
DDX56-203ENST00000421223 FBXW4P57775 412 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 STARD6P59095 220 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 CDK5R1Q15078 307 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 DMKNQ6E0U4 476 aaPredicted RBP9.95□□□□□ -0.82
DDX56-203ENST00000421223 LRRC69Q6ZNQ3 347 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 PRSS45Q7RTY3 260 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 MS4A15Q8N5U1 240 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 GCDHQ92947 438 aaPredicted RBP9.95□□□□□ -0.82
DDX56-203ENST00000421223 DERL3Q96Q80 235 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 NKX3-1Q99801 234 aaPredicted RBP9.95□□□□□ -0.82
DDX56-203ENST00000421223 CHRDQ9H2X0 955 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 NEK6Q9HC98 313 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 LAMP5Q9UJQ1 280 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 KLHDC2Q9Y2U9 406 aa9.95□□□□□ -0.82
DDX56-203ENST00000421223 FCER2P06734 321 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 EPHA4P54764 986 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 ACTA2P62736 377 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 ACTG2P63267 376 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 BDH1Q02338 343 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 MELKQ14680 651 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 HSD17B12Q53GQ0 312 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 MZT2BQ6NZ67 158 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 OR6V1Q8N148 313 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 ZNF501Q96CX3 271 aaPredicted RBP9.94□□□□□ -0.82
DDX56-203ENST00000421223 FYTTD1Q96QD9 318 aaKnown RBP9.94□□□□□ -0.82
DDX56-203ENST00000421223 APMAPQ9HDC9 416 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 ST6GALNAC2Q9UJ37 374 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 COLQQ9Y215 455 aaPredicted RBP9.94□□□□□ -0.82
DDX56-203ENST00000421223 RTTNQ86VV8 2226 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 GPR179Q6PRD1 2367 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 TRAV6A0A075B6T7 132 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 FZD7O75084 574 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 GLCEO94923 617 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 GIMD1P0DJR0 217 aa9.94□□□□□ -0.82
DDX56-203ENST00000421223 TFPIP10646 304 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms