RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 DMWDQ09019 674 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 IL18Q14116 193 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 QPRTQ15274 297 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 HLA-BQ31612 363 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZNF684Q5T5D7 378 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZNF385CQ66K41 422 aaPredicted RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZNF574Q6ZN55 896 aaPredicted RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 NRARPQ7Z6K4 114 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 NFAM1Q8NET5 270 aaPredicted RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 GPR119Q8TDV5 335 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZC3H10Q96K80 434 aaKnown RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 WDR76Q9H967 626 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RPRD1BQ9NQG5 326 aaKnown RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 INIPQ9NRY2 104 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SLC22A11Q9NSA0 550 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 MRPL39Q9NYK5 338 aaKnown RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 U3KQA8 63 aa13.2□□□□□ -0.3
HLA-DPA1-242ENST00000419277 IGLV3-32A0A0A0MS00 114 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TMED7-TICAM2A0A0A6YYA0 188 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 A0A1W2PQM1 296 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SHISA3A0PJX4 238 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 A6NIZ1 184 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SUSD5O60279 629 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 HPGDSO60760 199 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FZD7O75084 574 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ITGA10O75578 1167 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TRIOO75962 3097 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DXOO77932 396 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RAF1P04049 648 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 EDNRAP25101 427 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 AZGP1P25311 298 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 NAA10P41227 235 aaPredicted RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CDKN2AP42771 156 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 INPP1P49441 399 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RAP1BP61224 184 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RAP1AP62834 184 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RASGEF1BQ0VAM2 473 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SF3A2Q15428 464 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 MESTQ5EB52 335 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 IDNKQ5T6J7 187 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 C1orf140Q5VVS0 124 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PYHIN1Q6K0P9 492 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TMEM205Q6UW68 189 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 UNQ9370/PRO34162Q6UXP9 181 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SSX6Q7RTT6 188 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 MARCH3Q86UD3 253 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CDH24Q86UP0 819 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CDC20BQ86Y33 519 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TIGD4Q8IY51 512 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PRR22Q8IZ63 422 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RDH10Q8IZV5 341 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZBTB8BQ8NAP8 495 aaPredicted RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 IL17RDQ8NFM7 739 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ENKURQ8TC29 256 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SLC22A8Q8TCC7 542 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TAAR8Q969N4 342 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TSPAN32Q96QS1 320 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TXNIPQ9H3M7 391 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 MOV10Q9HCE1 1003 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TIGARQ9NQ88 270 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RBFOX1Q9NWB1 397 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PAIP2BQ9ULR5 123 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TMED7Q9Y3B3 224 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CPED1A4D0V7 1026 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FAM25AB3EWG3 89 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FAM25CB3EWG5 89 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FAM25GB3EWG6 89 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 E9PI62 339 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 LAMTOR5O43504 91 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 OR6A2O95222 327 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CRABP1P29762 137 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 THBS2P35442 1172 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 EIF2B2P49770 351 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 EMP2P54851 167 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 OR2B6P58173 313 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RPL27P61353 136 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TAB1Q15750 504 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TP53I3Q53FA7 332 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 HSD17B12Q53GQ0 312 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PRAMEF17Q5VTA0 474 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DNM1P34Q6PK57 102 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 LANCL3Q6ZV70 420 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DND1Q8IYX4 353 aaKnown RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZNF248Q8NDW4 579 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 C15orf40Q8WUR7 153 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 HPS1Q92902 700 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CCDC74BQ96LY2 380 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SLITRK2Q9H156 845 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FANCFQ9NPI8 374 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ACOXLQ9NUZ1 547 aa13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 VSX1Q9NZR4 365 aaPredicted RBP13.19□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CPAMD8Q8IZJ3 1885 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TMEM212A6NML5 194 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SELENOFO60613 162 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZFAND5O76080 213 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CD63P08962 238 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SHC1P29353 583 aa13.18□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ACVR1BP36896 505 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms