RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 OR8U8P0C7N1 319 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 THPOP40225 353 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ATXN7L3Q14CW9 347 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 NKAPLQ5M9Q1 402 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 C17orf99Q6UX52 265 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 UNQ6126/PRO20091Q6UXV3 157 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 NDUFAF7Q7L592 441 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM173Q86WV6 379 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 TRAM1L1Q8N609 369 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 SLC30A7Q8NEW0 376 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PHOSPHO2Q8TCD6 241 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 C2orf15Q8WU43 125 aaKnown RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 SNX33Q8WV41 574 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PPP1R1CQ8WVI7 109 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 UPB1Q9UBR1 384 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 GNG8Q9UK08 70 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 C2orf74A8MZ97 194 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 MCIDASD6RGH6 385 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 F8VVB4 439 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 F8VWA3 439 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ZIC2O95409 532 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 CD74P04233 296 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 NTSP30990 170 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 P2RY4P51582 365 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 DEFA6Q01524 100 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF234Q14588 700 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 IRF4Q15306 451 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 CCL14Q16627 93 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF658BQ4V348 819 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 C9orf152Q5JTZ5 239 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 LRRTM1Q86UE6 522 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 OR56A1Q8NGH5 318 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 OR4C6Q8NH72 309 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PFN4Q8NHR9 129 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 RPS4Y2Q8TD47 263 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF689Q96CS4 500 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 PIK3IP1Q96FE7 263 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 MNTQ99583 582 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 NAA11Q9BSU3 229 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 RIOK2Q9BVS4 552 aaKnown RBP7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 SYNPO2LQ9H987 977 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 SEC61A2Q9H9S3 476 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 FKRPQ9H9S5 495 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 UCK1Q9HA47 277 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 UFSP2Q9NUQ7 469 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 DZANK1Q9NVP4 752 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 CLDND1Q9NY35 253 aa7.35□□□□□ -1.23
HMGXB4-202ENST00000418170 KIAA1549LQ6ZVL6 1849 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 MT-ND4LP03901 98 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 CD3DP04234 171 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 TPT1P13693 172 aaKnown RBP7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 CERS1P27544 350 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 PMELP40967 661 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 CSNK1EP49674 416 aaKnown RBP7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 ATP1B3P54709 279 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 EPHB3P54753 998 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 SMAD3P84022 425 aaKnown RBP7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 LTBQ06643 244 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 RBM39Q14498 530 aaKnown RBP7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 LCTLQ6UWM7 567 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 STAC2Q6ZMT1 411 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 WDR88Q6ZMY6 472 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 ARL14Q8N4G2 192 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 INO80EQ8NBZ0 244 aaPredicted RBP7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 CLEC1AQ8NC01 280 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 OR4K14Q8NGD5 310 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 OR13C2Q8NGS9 318 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 CLCC1Q96S66 551 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 TMPRSS5Q9H3S3 457 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 ZDHHC6Q9H6R6 413 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 SIGLEC7Q9Y286 467 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 ASF1AQ9Y294 204 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 ZNF281Q9Y2X9 895 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 POM121BA6NF01 834 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 HMGA1P17096 107 aaKnown RBP7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 PSMB10P40306 273 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 MAGEB1P43366 347 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM115Q12893 351 aaPredicted RBP7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 LMAN2Q12907 356 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 MRM1Q6IN84 353 aaKnown RBP7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 STEAP1BQ6NZ63 245 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 TMEM220Q6QAJ8 160 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 STX12Q86Y82 276 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 AMER3Q8N944 861 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 POMGNT2Q8NAT1 580 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 RGP1Q92546 391 aaPredicted RBP7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 HSPA12BQ96MM6 686 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 SPSB2Q99619 263 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 TEX101Q9BY14 249 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 RRAGCQ9HB90 399 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 Q9Y3F1 56 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 LTBP2Q14767 1821 aa7.34□□□□□ -1.23
HMGXB4-202ENST00000418170 GPR37O15354 613 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 PPIHO43447 177 aaKnown RBP7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 FCMRO60667 390 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 RNF224P0DH78 156 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF14P17017 642 aaPredicted RBP7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 ADRA2CP18825 462 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 NDUFS1P28331 727 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF136P52737 540 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms