RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 MRPS17Q9Y2R5 130 aaKnown RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 NYNRINQ9P2P1 1898 aaKnown RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 ASCC3Q8N3C0 2202 aaKnown RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 LIMS3P0CW19 117 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 LIMS4P0CW20 117 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 MPC1LP0DKB6 136 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 RAB5AP20339 215 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 AK4P27144 223 aaPredicted RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 CDX1P47902 265 aaPredicted RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 PNLIPRP1P54315 467 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 RPP30P78346 268 aaKnown RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 PJVKQ0ZLH3 352 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 ALG11Q2TAA5 492 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 NCMAPQ5T1S8 102 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 GLT8D1Q68CQ7 371 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 ADAM5Q6NVV9 412 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 CEACAM19Q7Z692 300 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 TSEN54Q7Z6J9 526 aaKnown RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 ZNF761Q86XN6 746 aaPredicted RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 CLECL1Q8IZS7 167 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 IQCF1Q8N6M8 205 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 OR5D16Q8NGK9 328 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 XAGE5Q8WWM1 108 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 VWCEQ96DN2 955 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 CPNE2Q96FN4 548 aaPredicted RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 RBM18Q96H35 190 aaKnown RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 SOX7Q9BT81 388 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 RSRP1Q9BUV0 290 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 MRPS30Q9NP92 439 aaKnown RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 C2orf42Q9NWW7 574 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 THAP10Q9P2Z0 257 aaPredicted RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 TMEM184BQ9Y519 407 aaPredicted RBP7.22□□□□□ -1.25
SIK3-203ENST00000415541 SPACA6W5XKT8 324 aa7.22□□□□□ -1.25
SIK3-203ENST00000415541 TRPM6Q9BX84 2022 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 FEZF1A0PJY2 475 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 GLOD5A6NK44 160 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 NDUFB6O95139 128 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 F12P00748 615 aaPredicted RBP7.21□□□□□ -1.25
SIK3-203ENST00000415541 ATP1B1P05026 303 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 CLUP10909 449 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 EPXP11678 715 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 TPT1P13693 172 aaKnown RBP7.21□□□□□ -1.25
SIK3-203ENST00000415541 ADCYAP1P18509 176 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 IFNGR2P38484 337 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 NRG3P56975 720 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 CDK3Q00526 305 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 FOXK2Q01167 660 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 AIMP2Q13155 320 aaKnown RBP7.21□□□□□ -1.25
SIK3-203ENST00000415541 KIAA0141Q14154 515 aaPredicted RBP7.21□□□□□ -1.25
SIK3-203ENST00000415541 ZNF345Q14585 488 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 CRB2Q5IJ48 1285 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 TMEM244Q5VVB8 128 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 SP7Q8TDD2 431 aaPredicted RBP7.21□□□□□ -1.25
SIK3-203ENST00000415541 SLC22A18Q96BI1 424 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 MISP3Q96FF7 219 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 APIPQ96GX9 242 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 FAM83CQ9BQN1 747 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 PLEKHA1Q9HB21 404 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 UPB1Q9UBR1 384 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 KPTNQ9Y664 436 aa7.21□□□□□ -1.25
SIK3-203ENST00000415541 GVINP1Q7Z2Y8 2422 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 TRBV4-1A0A0J9YWV2 114 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 SHISA3A0PJX4 238 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 CXorf65A6NEN9 183 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 B3GALT4O96024 378 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 TACR1P25103 407 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 CMPK1P30085 196 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 SOX18P35713 384 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 TAS2R50P59544 299 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 PRRT3Q5FWE3 981 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 HIST2H3PS2Q5TEC6 136 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 ARHGAP40Q5TG30 622 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 ACOT7LQ6ZUV0 252 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 NEIL2Q969S2 332 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 RERGQ96A58 199 aaPredicted RBP7.21□□□□□ -1.26
SIK3-203ENST00000415541 CLCC1Q96S66 551 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 OPN3Q9H1Y3 402 aaPredicted RBP7.21□□□□□ -1.26
SIK3-203ENST00000415541 UBQLN3Q9H347 655 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 SEC61A2Q9H9S3 476 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 CALML5Q9NZT1 146 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 SEC14L6B5MCN3 397 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 ERI3O43414 337 aaKnown RBP7.21□□□□□ -1.26
SIK3-203ENST00000415541 HOXB5P09067 269 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 ALPPL2P10696 532 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 ETFAP13804 333 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 HOXA5P20719 270 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 DLSTP36957 453 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 OPRD1P41143 372 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 TAS2R43P59537 309 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 OR2B8PP59922 312 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 ZNF791Q3KP31 576 aaPredicted RBP7.21□□□□□ -1.26
SIK3-203ENST00000415541 LIPNQ5VXI9 398 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 LIPJQ5W064 366 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 PRSS45Q7RTY3 260 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 OR7G2Q8NG99 324 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 ZNF480Q8WV37 535 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 SLC25A36Q96CQ1 311 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 WDR89Q96FK6 387 aaPredicted RBP7.21□□□□□ -1.26
SIK3-203ENST00000415541 POM121Q96HA1 1249 aa7.21□□□□□ -1.26
SIK3-203ENST00000415541 OR1F2PQ96R84 312 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms