RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 LINGO2Q7L985 606 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 FGD2Q7Z6J4 655 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 GLB1L2Q8IW92 636 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 CDK20Q8IZL9 346 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 POMGNT2Q8NAT1 580 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 OR2T35Q8NGX2 323 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 RPLP0P6Q8NHW5 317 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 STK35Q8TDR2 534 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 MRGPRX1Q96LB2 322 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 HSPA12BQ96MM6 686 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 WDR92Q96MX6 357 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 UTP23Q9BRU9 249 aaKnown RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 CHIAQ9BZP6 476 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 POLE3Q9NRF9 147 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 ZNF275Q9NSD4 429 aaPredicted RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 SCP2D1Q9UJQ7 156 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 TRBV5-5A0A0J9YX44 114 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 PROS1P07225 676 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 UBL4AP11441 157 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 NTSR1P30989 418 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 GBX2P52951 348 aaPredicted RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 RAB38P57729 211 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 GRK1Q15835 563 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 ITPRIPL2Q3MIP1 535 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 CLLU1Q5K131 121 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 OLFML2AQ68BL7 652 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 ULK3Q6PHR2 472 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 DPY19L2P2Q6ZN68 376 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 SLC36A1Q7Z2H8 476 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 BCORP1Q8N888 145 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 ZNF615Q8N8J6 731 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 GATSQ8NAP1 163 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 FAM71CQ8NEG0 241 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 PPP1R14AQ96A00 147 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 NXPE2Q96DL1 559 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 SGTBQ96EQ0 304 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 GPX7Q96SL4 187 aaPredicted RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 IGFLR1Q9H665 355 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 C14orf105Q9NVL8 296 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 HCN3Q9P1Z3 774 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 FBXL3Q9UKT7 428 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 MOKQ9UQ07 419 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 KCNMB2Q9Y691 235 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 A0A0A6YYC8 382 aaPredicted RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 TMEM72A0PK05 275 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 SHISA7A6NL88 538 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 GABARAPH6UMI1 98 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 I3L1I5 382 aaPredicted RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 TSPAN4O14817 238 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 ARPC3O15145 178 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 OR7A10O76100 309 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 ALDOBP05062 364 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 IFI6P09912 130 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 PSMB1P20618 241 aaKnown RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 MAOAP21397 527 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 TNFRSF4P43489 277 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 MECP2P51608 486 aaKnown RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 H2BFSP57053 126 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 ACTA2P62736 377 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 ACTG2P63267 376 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 SNTA1Q13424 505 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 MELKQ14680 651 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 NHLRC3Q5JS37 347 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 GLDNQ6ZMI3 551 aaPredicted RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 NUDT18Q6ZVK8 323 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 CHMP1BQ7LBR1 199 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 CDH24Q86UP0 819 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 COMMD7Q86VX2 200 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 WDFY1Q8IWB7 410 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 AVL9Q8NBF6 648 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 UXS1Q8NBZ7 420 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 OR6K6Q8NGW6 343 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 C16orf52Q8NHV5 167 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 SYNPRQ8TBG9 265 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 PHOSPHO2Q8TCD6 241 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 SLC37A2Q8TED4 501 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 SNX33Q8WV41 574 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 SLC22A18Q96BI1 424 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 PBX4Q9BYU1 374 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 WDR76Q9H967 626 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 CPNE7Q9UBL6 633 aa8.98□□□□□ -0.97
SS18-203ENST00000415083 PPIEQ9UNP9 301 aaKnown RBP8.98□□□□□ -0.97
SS18-203ENST00000415083 TMEM272A0A1B0GTI8 110 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 AKR7A3O95154 331 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 KLF8O95600 359 aaPredicted RBP8.97□□□□□ -0.97
SS18-203ENST00000415083 RRASP10301 218 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 UBE2MP61081 183 aaKnown RBP8.97□□□□□ -0.97
SS18-203ENST00000415083 IGLV3-21P80748 117 aaPredicted RBP8.97□□□□□ -0.97
SS18-203ENST00000415083 KLHL26Q53HC5 615 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 MESTQ5EB52 335 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 TCTE1Q5JU00 501 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 ELFN2Q5R3F8 820 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 OR5M10Q6IEU7 315 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 MAMSTRQ6ZN01 415 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 DND1Q8IYX4 353 aaKnown RBP8.97□□□□□ -0.97
SS18-203ENST00000415083 OR13H1Q8NG92 308 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 DNAJA3Q96EY1 480 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 KLHL15Q96M94 604 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 ALG12Q9BV10 488 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 C1QTNF7Q9BXJ2 289 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms