RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 KLHL15Q96M94 604 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 HCAR1Q9BXC0 346 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 AMBNQ9NP70 447 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 FANCFQ9NPI8 374 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 INIPQ9NRY2 104 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 QPCTLQ9NXS2 382 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 ERVK-18Q9QC07 812 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS41-204ENST00000413141 TRAPPC4Q9Y296 219 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 B3GALT5Q9Y2C3 310 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 RPL36Q9Y3U8 105 aaKnown RBP5.97□□□□□ -1.45
VPS41-204ENST00000413141 PCDHGA9Q9Y5G4 932 aaKnown RBP5.97□□□□□ -1.45
VPS41-204ENST00000413141 SPTBN2O15020 2390 aa5.97□□□□□ -1.45
VPS41-204ENST00000413141 A0A0J9YW62 118 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 CCDC182A6NF36 153 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 AQP7P3A6NL99 342 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SNTNA6NMZ2 147 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 ZNF814B7Z6K7 855 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 PRR23D1E9PI22 279 aaPredicted RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 MS4A18H0YCH9 400 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 LINC01387J3KSC0 135 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 K7ENP7 123 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 M0R3G1 203 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SULT2B1O00204 365 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 TNFSF11O14788 317 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SEC14L5O43304 696 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 DNPH1O43598 174 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SERPINI2O75830 405 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 AKR7A3O95154 331 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 FADS2O95864 444 aaKnown RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 CDK1P06493 297 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 STSP08842 583 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 ADRA2AP08913 450 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 PRR23D2P0DMB1 279 aaPredicted RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 HLA-DOBP13765 273 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 POU3F2P20265 443 aaPredicted RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 PCMT1P22061 227 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 PAICSP22234 425 aaKnown RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 SLC2A5P22732 501 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 AHCYP23526 432 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 ACVR2AP27037 513 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 HTR1FP30939 366 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 RPL5P46777 297 aaKnown RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 MTNR1AP48039 350 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 ALDH3B2P48448 385 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 NR1H2P55055 460 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 CLDN20P56880 219 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 TMPRSS3P57727 454 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 OR2B6P58173 313 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 RPL27P61353 136 aaKnown RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 PPIAP62937 165 aaKnown RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 CSNK2A1P68400 391 aaPredicted RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 SLC35A1P78382 337 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 POU3F1Q03052 451 aaPredicted RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 MVKQ03426 396 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 RAB40BQ12829 278 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 ITGADQ13349 1161 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 MELKQ14680 651 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 TBCEQ15813 527 aaPredicted RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 ACKR1Q16570 336 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 ZNF239Q16600 458 aaKnown RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 MS4A18Q3C1V0 323 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 XAF1Q6GPH4 301 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 LEG1Q6P5S2 330 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 BORAQ6PGQ7 559 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 INO80CQ6PI98 192 aaPredicted RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 PAQR6Q6TCH4 344 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 IGFL3Q6UXB1 125 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 TMPPEQ6ZT21 453 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 KCTD8Q6ZWB6 473 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 TRILQ7L0X0 811 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 ADCK1Q86TW2 530 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SLC22A16Q86VW1 577 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SPARTQ8N0X7 666 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 FAM109AQ8N4B1 249 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 TMEM99Q8N816 258 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 CYB561A3Q8NBI2 242 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 NPEPL1Q8NDH3 523 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 RFKQ969G6 155 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 MYDGFQ969H8 173 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 RNFT2Q96EX2 444 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 ADGRG7Q96K78 797 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 NMNAT3Q96T66 252 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SRXN1Q9BYN0 137 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 NMNAT2Q9BZQ4 307 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 CCDC90BQ9GZT6 254 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SLC6A15Q9H2J7 730 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 TXNIPQ9H3M7 391 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 MED20Q9H944 212 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 BATF3Q9NR55 127 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 B3GAT1Q9P2W7 334 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 GRHPRQ9UBQ7 328 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 ZNF346Q9UL40 294 aaKnown RBP5.96□□□□□ -1.46
VPS41-204ENST00000413141 RAXQ9Y2V3 346 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 PCDHGB1Q9Y5G3 927 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SNX5Q9Y5X3 404 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 LIPGQ9Y5X9 500 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 APC2O95996 2303 aa5.96□□□□□ -1.46
VPS41-204ENST00000413141 SPTBN4Q9H254 2564 aa5.95□□□□□ -1.46
VPS41-204ENST00000413141 A0A1W2PRG6 482 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms