RNA–Protein interactions for RNA: ENST00000413013.6

SMIM29-203, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-203ENST00000413013 USP22Q9UPT9 525 aa15.34■□□□□ 0.05
SMIM29-203ENST00000413013 WDR45Q9Y484 360 aa15.34■□□□□ 0.05
SMIM29-203ENST00000413013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.34■□□□□ 0.054e-9■■■□□ 19
SMIM29-203ENST00000413013 ELOVL7A1L3X0 281 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 PRAMEF27A3QJZ7 478 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 LY6HO94772 140 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 TCN1P20061 433 aaPredicted RBP15.33■□□□□ 0.04
SMIM29-203ENST00000413013 MSX2P35548 267 aaPredicted RBP15.33■□□□□ 0.04
SMIM29-203ENST00000413013 NR4A2P43354 598 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 PRPS1P60891 318 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 SLC35A1P78382 337 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 RBBP4Q09028 425 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 VMACQ2NL98 169 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 IQCCQ4KMZ1 466 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 ERICH5Q6P6B1 374 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 SLC46A3Q7Z3Q1 461 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 ABHD12BQ7Z5M8 362 aaPredicted RBP15.33■□□□□ 0.04
SMIM29-203ENST00000413013 CCDC103Q8IW40 242 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 MICU2Q8IYU8 434 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 FAM156AQ8NDB6 213 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 MAL2Q969L2 176 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 OR11A1Q9GZK7 315 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 EXOSC3Q9NQT5 275 aaKnown RBP15.33■□□□□ 0.04
SMIM29-203ENST00000413013 TRAPPC4Q9Y296 219 aa15.33■□□□□ 0.04
SMIM29-203ENST00000413013 VWC2LB2RUY7 222 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 ANKRD65E5RJM6 399 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 PDLIM1O00151 329 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 GUSBP08236 651 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 ARAFP10398 606 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 NQO1P15559 274 aaKnown RBP15.32■□□□□ 0.04
SMIM29-203ENST00000413013 CCNA2P20248 432 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 MPGP29372 298 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 CDK6Q00534 326 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 TRIM25Q14258 630 aaKnown RBP15.32■□□□□ 0.04
SMIM29-203ENST00000413013 MAPK11Q15759 364 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 FXNQ16595 210 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 WDR31Q8NA23 367 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 C11orf65Q8NCR3 313 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 ZNF540Q8NDQ6 660 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 SLC38A5Q8WUX1 472 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 PMM1Q92871 262 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 MSI2Q96DH6 328 aaKnown RBP15.32■□□□□ 0.04
SMIM29-203ENST00000413013 SLC7A10Q9NS82 523 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.32■□□□□ 0.04
SMIM29-203ENST00000413013 MOKQ9UQ07 419 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 FLVCR1Q9Y5Y0 555 aa15.32■□□□□ 0.04
SMIM29-203ENST00000413013 HEATR1Q9H583 2144 aaKnown RBP15.32■□□□□ 0.04
SMIM29-203ENST00000413013 MALRD1Q5VYJ5 2156 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 LOC390937A0A1W2PQ73 354 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 CFAP73A6NFT4 308 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 NR2F1P10589 423 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 UQCRBP14927 111 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 PCGF2P35227 344 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 POLR2HP52434 150 aaKnown RBP15.31■□□□□ 0.04
SMIM29-203ENST00000413013 FOXG1P55316 489 aaPredicted RBP15.31■□□□□ 0.04
SMIM29-203ENST00000413013 MS4A2Q01362 244 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 MAPK14Q16539 360 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 TYW3Q6IPR3 259 aaKnown RBP15.31■□□□□ 0.04
SMIM29-203ENST00000413013 OLIG3Q7RTU3 272 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 ANKFN1Q8N957 763 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 NFKBIDQ8NI38 313 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 SORCS2Q96PQ0 1159 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 TRNT1Q96Q11 434 aaKnown RBP15.31■□□□□ 0.04
SMIM29-203ENST00000413013 RAB3IPQ96QF0 476 aaPredicted RBP15.31■□□□□ 0.04
SMIM29-203ENST00000413013 VRK1Q99986 396 aaPredicted RBP15.31■□□□□ 0.04
SMIM29-203ENST00000413013 PCDHAC1Q9H158 963 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 OBP2BQ9NPH6 170 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 P2RX2Q9UBL9 471 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 SLC7A8Q9UHI5 535 aa15.31■□□□□ 0.04
SMIM29-203ENST00000413013 TMED7-TICAM2A0A0A6YYA0 188 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 SLC35F4A4IF30 521 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 TMEM247A6NEH6 219 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 GSTA4O15217 222 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 ZNF208O43345 1280 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 KRT33AO76009 404 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 ERCC1P07992 297 aaPredicted RBP15.3■□□□□ 0.04
SMIM29-203ENST00000413013 PAX7P23759 505 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 NTF4P34130 210 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 IDH2P48735 452 aaKnown RBP15.3■□□□□ 0.04
SMIM29-203ENST00000413013 SRSF2Q01130 221 aaKnown RBP15.3■□□□□ 0.04
SMIM29-203ENST00000413013 FUT5Q11128 374 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 TRAP1Q12931 704 aaKnown RBP15.3■□□□□ 0.04
SMIM29-203ENST00000413013 BNIP2Q12982 314 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 SCARB2Q14108 478 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 GNA13Q14344 377 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 SYPL1Q16563 259 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 SWI5Q1ZZU3 235 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 GPAT3Q53EU6 434 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 TSPO2Q5TGU0 170 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 AP1ARQ63HQ0 302 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 REEP3Q6NUK4 255 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 ADGRG3Q86Y34 549 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 SLC30A8Q8IWU4 369 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 POMGNT2Q8NAT1 580 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 TMEM45BQ96B21 275 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 TMEM19Q96HH6 336 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 PRR14Q9BWN1 585 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 EGFL7Q9UHF1 273 aa15.3■□□□□ 0.04
SMIM29-203ENST00000413013 FBXO9Q9UK97 447 aaPredicted RBP15.3■□□□□ 0.04
SMIM29-203ENST00000413013 TMED7Q9Y3B3 224 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms