RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ELK1P19419 428 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 SELENOWP63302 87 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 H3F3AP84243 136 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 PLCXD2Q0VAA5 305 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 PTPRRQ15256 657 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 DCST2Q5T1A1 773 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 CES4AQ5XG92 561 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 LYSMD4Q5XG99 296 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 RABEPKQ7Z6M1 372 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 OR5M9Q8NGP3 310 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 DOK4Q8TEW6 326 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 THAP3Q8WTV1 239 aaPredicted RBP7.9□□□□□ -1.15
PBRM1-209ENST00000412587 HPSE2Q8WWQ2 592 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 APIPQ96GX9 242 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 KATNB1Q9BVA0 655 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 OR52A5Q9H2C5 316 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 SHPKQ9UHJ6 478 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 EXO1Q9UQ84 846 aaKnown RBP7.9□□□□□ -1.15
PBRM1-209ENST00000412587 DDX60LQ5H9U9 1706 aaKnown RBP7.9□□□□□ -1.15
PBRM1-209ENST00000412587 RFPL4AA6NLU0 287 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 MCRIP1C9JLW8 97 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 RFPL4AL1F8VTS6 287 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 H3BNC9 293 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 GABRA1P14867 456 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 S100GP29377 79 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 ADRA1AP35348 466 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 TAGLN2P37802 199 aaKnown RBP7.9□□□□□ -1.15
PBRM1-209ENST00000412587 SGSHP51688 502 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 FOXA1P55317 472 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 OR12D2P58182 307 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 COL9A2Q14055 689 aaPredicted RBP7.9□□□□□ -1.15
PBRM1-209ENST00000412587 KIR2DS3Q14952 304 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 DEFB133Q30KQ1 61 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 TMEM31Q5JXX7 168 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 CNTN4Q8IWV2 1026 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 TEX26Q8N6G2 289 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 PNLDC1Q8NA58 520 aaKnown RBP7.9□□□□□ -1.15
PBRM1-209ENST00000412587 NXPE3Q969Y0 559 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 TMEM18Q96B42 140 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 RNF170Q96K19 258 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 DPH2Q9BQC3 489 aaPredicted RBP7.9□□□□□ -1.15
PBRM1-209ENST00000412587 C20orf24Q9BUV8 137 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 OR11A1Q9GZK7 315 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 LRFN1Q9P244 771 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 EPHA6Q9UF33 1036 aa7.9□□□□□ -1.15
PBRM1-209ENST00000412587 A0A1W2PS29 197 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 ANKUB1A6NFN9 424 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 HMSDA8MTL9 139 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 IL33O95760 270 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 IFNA1P01562 189 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 CXCL10P02778 98 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 SFTPBP07988 381 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 NMBP08949 121 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 LAMP1P11279 417 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 PGAM2P15259 253 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 CD38P28907 300 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 SLC6A6P31641 620 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 ARRB2P32121 409 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 ACVR1BP36896 505 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 RBMXP38159 391 aaKnown RBP7.89□□□□□ -1.15
PBRM1-209ENST00000412587 RPS15P62841 145 aaKnown RBP7.89□□□□□ -1.15
PBRM1-209ENST00000412587 RPS26P62854 115 aaKnown RBP7.89□□□□□ -1.15
PBRM1-209ENST00000412587 ARHGAP19Q14CB8 494 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 AWAT2Q6E213 333 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 LCTLQ6UWM7 567 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 RSPO2Q6UXX9 243 aaPredicted RBP7.89□□□□□ -1.15
PBRM1-209ENST00000412587 NANOGP1Q8N7R0 232 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 PHYHIPLQ96FC7 376 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 CMTM3Q96MX0 182 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 RSRP1Q9BUV0 290 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 GDF2Q9UK05 429 aaPredicted RBP7.89□□□□□ -1.15
PBRM1-209ENST00000412587 DKKL1Q9UK85 242 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 PCDHGA5Q9Y5G8 931 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 PRSS21Q9Y6M0 314 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 SIPA1L3O60292 1781 aaPredicted RBP7.89□□□□□ -1.15
PBRM1-209ENST00000412587 A0A1W2PPK0 400 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 LNP1A1A4G5 178 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 SOX1O00570 391 aaPredicted RBP7.89□□□□□ -1.15
PBRM1-209ENST00000412587 TCF21O43680 179 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 AK1P00568 194 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 C1SP09871 688 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 PYCR1P32322 319 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 MC3RP41968 323 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 TAS2R38P59533 333 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 ACY1Q03154 408 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 NUMA1Q14980 2115 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 OR8G1Q15617 311 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 NSDHLQ15738 373 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 MPPED2Q15777 294 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 VAMP3Q15836 100 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 UBE2NLQ5JXB2 153 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 OR2G6Q5TZ20 316 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 SFXN4Q6P4A7 337 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 CLECL1Q8IZS7 167 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 PGBD5Q8N414 524 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 FAM86B1Q8N7N1 296 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 RAB24Q969Q5 203 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 NEIL2Q969S2 332 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 LPAR4Q99677 370 aa7.89□□□□□ -1.15
PBRM1-209ENST00000412587 PITX2Q99697 317 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms