RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 FNDC11Q9BVV2 318 aa11.61□□□□□ -0.55
HDAC8-210ENST00000412342 ACTR6Q9GZN1 396 aa11.61□□□□□ -0.55
HDAC8-210ENST00000412342 SLCO5A1Q9H2Y9 848 aa11.61□□□□□ -0.55
HDAC8-210ENST00000412342 ANKRD19PQ9H560 264 aa11.61□□□□□ -0.55
HDAC8-210ENST00000412342 NMNAT1Q9HAN9 279 aaPredicted RBP11.61□□□□□ -0.55
HDAC8-210ENST00000412342 NANSQ9NR45 359 aa11.61□□□□□ -0.55
HDAC8-210ENST00000412342 C6orf203Q9P0P8 240 aaPredicted RBP11.61□□□□□ -0.55
HDAC8-210ENST00000412342 NDRG3Q9UGV2 375 aa11.61□□□□□ -0.55
HDAC8-210ENST00000412342 MED31Q9Y3C7 131 aa11.61□□□□□ -0.55
HDAC8-210ENST00000412342 CSMD2Q7Z408 3487 aa11.61□□□□□ -0.55
HDAC8-210ENST00000412342 PDZD2O15018 2839 aa11.61□□□□□ -0.55
HDAC8-210ENST00000412342 A0A1W2PRQ8 180 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 DEFB108AA8MXU0 73 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 LYZL6O75951 148 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 NQO1P15559 274 aaKnown RBP11.6□□□□□ -0.55
HDAC8-210ENST00000412342 PPP3CBP16298 524 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 ZNF43P17038 809 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 LOXP28300 417 aaPredicted RBP11.6□□□□□ -0.55
HDAC8-210ENST00000412342 MAGEA2P43356 314 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 CLDN17P56750 224 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 POU3F1Q03052 451 aaPredicted RBP11.6□□□□□ -0.55
HDAC8-210ENST00000412342 LGALS3BPQ08380 585 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 FAPQ12884 760 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 FHL1Q13642 323 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 DGCR6Q14129 220 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 DNAL1Q4LDG9 190 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 MTX3Q5HYI7 312 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 NIPAL3Q6P499 406 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 PXKQ7Z7A4 578 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 UEVLDQ8IX04 471 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 NRMQ8IXM6 262 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 STEAP2Q8NFT2 490 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 SLC7A13Q8TCU3 470 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 ACOT11Q8WXI4 607 aaPredicted RBP11.6□□□□□ -0.55
HDAC8-210ENST00000412342 KISS1RQ969F8 398 aaPredicted RBP11.6□□□□□ -0.55
HDAC8-210ENST00000412342 BTBD10Q9BSF8 475 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 HDHD5Q9BXW7 423 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 LINC00470Q9BZP3 86 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 IL1RAPQ9NPH3 570 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 RASSF1Q9NS23 344 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 ASB6Q9NWX5 421 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 ALPK2Q86TB3 2170 aa11.6□□□□□ -0.55
HDAC8-210ENST00000412342 TACC2O95359 2948 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 A0A1W2PPR1 153 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 HTR3EA5X5Y0 456 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 GYG2O15488 501 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 UPK3AO75631 287 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 GOSR1O95249 250 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 HRGP04196 525 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 H1F0P07305 194 aaKnown RBP11.59□□□□□ -0.55
HDAC8-210ENST00000412342 ADORA3P0DMS8 318 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 IFI30P13284 250 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 FUT1P19526 365 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 MAKP20794 623 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 IFNA8P32881 189 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 RPS4XP62701 263 aaKnown RBP11.59□□□□□ -0.55
HDAC8-210ENST00000412342 PRKCDQ05655 676 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 FOXD4Q12950 439 aaPredicted RBP11.59□□□□□ -0.55
HDAC8-210ENST00000412342 TAB1Q15750 504 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 TBPL2Q6SJ96 375 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 MBOAT2Q6ZWT7 520 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 BHLHA15Q7RTS1 189 aaPredicted RBP11.59□□□□□ -0.55
HDAC8-210ENST00000412342 PIWIL3Q7Z3Z3 882 aaKnown RBP11.59□□□□□ -0.55
HDAC8-210ENST00000412342 NANOGNBQ7Z5D8 188 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 CYP4Z1Q86W10 505 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 DHFR2Q86XF0 187 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 RNF113BQ8IZP6 322 aaKnown RBP11.59□□□□□ -0.55
HDAC8-210ENST00000412342 POMGNT2Q8NAT1 580 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 CCDC124Q96CT7 223 aaKnown RBP11.59□□□□□ -0.55
HDAC8-210ENST00000412342 BPIFA2Q96DR5 249 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 TXNDC15Q96J42 360 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 OR2M2Q96R28 347 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 PIP5K1AQ99755 562 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 MED18Q9BUE0 208 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 CADM1Q9BY67 442 aaKnown RBP11.59□□□□□ -0.55
HDAC8-210ENST00000412342 MED29Q9NX70 200 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 TAS2R16Q9NYV7 291 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 NOX1Q9Y5S8 564 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 ABCA4P78363 2273 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 MAST4O15021 2626 aa11.59□□□□□ -0.55
HDAC8-210ENST00000412342 RAI1Q7Z5J4 1906 aaPredicted RBP11.58□□□□□ -0.55
HDAC8-210ENST00000412342 LRBAP50851 2863 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 POLQO75417 2590 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 TRBV4-1A0A0J9YWV2 114 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 C11orf98E9PRG8 122 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 GSC2O15499 205 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 KLF4O43474 513 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 FABP3P05413 133 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 UMPSP11172 480 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 IL32P24001 234 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 RPL18Q07020 188 aaKnown RBP11.58□□□□□ -0.56
HDAC8-210ENST00000412342 TRAP1Q12931 704 aaKnown RBP11.58□□□□□ -0.56
HDAC8-210ENST00000412342 C1DQ13901 141 aaKnown RBP11.58□□□□□ -0.56
HDAC8-210ENST00000412342 SEC23BQ15437 767 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 GABRA6Q16445 453 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 PHYHD1Q5SRE7 291 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 PODNL1Q6PEZ8 512 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 TMPRSS11FQ6ZWK6 438 aa11.58□□□□□ -0.56
HDAC8-210ENST00000412342 MEX3DQ86XN8 651 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms