RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 TMEM104Q8NE00 496 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 OR4D9Q8NGE8 314 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 PHOSPHO2Q8TCD6 241 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 DQX1Q8TE96 717 aaKnown RBP0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 RTN4IP1Q8WWV3 396 aaPredicted RBP0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 EEF2KMTQ96G04 330 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 NARS2Q96I59 477 aaKnown RBP0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 C12orf66Q96MD2 445 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 SULT4A1Q9BR01 284 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZSCAN5AQ9BUG6 496 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 POLR1EQ9GZS1 481 aaKnown RBP0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 TMEM231Q9H6L2 316 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 PRMT8Q9NR22 394 aaPredicted RBP0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 COMMD8Q9NX08 183 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 XCL2Q9UBD3 114 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 SEC14L3Q9UDX4 400 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 RAB23Q9ULC3 237 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 RNF6Q9Y252 685 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 SPACA6W5XKT8 324 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 MED13Q9UHV7 2174 aa0.23□□□□□ -2.37
RNU2-55P-201ENST00000411146 ICE1Q9Y2F5 2266 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ADAMTS13Q76LX8 1427 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 SF3B1O75533 1304 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 IGHV3OR16-8A0A075B7F1 116 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 A0A0U1RQV5 110 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 C12orf71A8MTZ7 269 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 KMOO15229 486 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 TBX19O60806 448 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 GCM2O75603 506 aaPredicted RBP0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 BCHEP06276 602 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 KLK3P07288 261 aaPredicted RBP0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 CSF3P09919 207 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 OR56A5P0C7T3 313 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 GKN3PP0CG01 181 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ARL14EPLP0DKL9 152 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 RALAP11233 206 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 FOLR1P15328 257 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 HPGDP15428 266 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ANXA13P27216 316 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 CALCRP30988 508 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 CX3CR1P49238 355 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 GPM6AP51674 278 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 FAM53BQ14153 422 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 MXD4Q14582 209 aaPredicted RBP0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 TRIP10Q15642 601 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 POU2AF1Q16633 256 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZBED5Q49AG3 693 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZFP1Q6P2D0 407 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 HSDL2Q6YN16 418 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 STRADAQ7RTN6 431 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 BHLHA15Q7RTS1 189 aaPredicted RBP0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 KIAA1328Q86T90 577 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZNF546Q86UE3 836 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 TMEM17Q86X19 198 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 CBWD2Q8IUF1 395 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ST20-AS1Q8NBB2 130 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 DENND6BQ8NEG7 585 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 OR5AU1Q8NGC0 362 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 OR5M1Q8NGP8 315 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ACOT11Q8WXI4 607 aaPredicted RBP0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 FCGR1BQ92637 280 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 KRT35Q92764 455 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 HPDLQ96IR7 371 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 SLC30A2Q9BRI3 323 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZNF649Q9BS31 505 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 GABARAPL3Q9BY60 117 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 SMYD3Q9H7B4 428 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 ZWILCHQ9H900 591 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 KLHL28Q9NXS3 571 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 RDH8Q9NYR8 311 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 HMG20BQ9P0W2 317 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 SPATA7Q9P0W8 599 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 KCNN3Q9UGI6 736 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 FETUBQ9UGM5 382 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 NPIPA1Q9UND3 350 aa0.22□□□□□ -2.37
RNU2-55P-201ENST00000411146 DOCK6Q96HP0 2047 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 IGLV3-22A0A075B6J6 115 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 TRBV2A0A0J9YWF9 115 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 ZNF716A6NP11 495 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 TRDCB7Z8K6 153 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 DDX39AO00148 427 aaKnown RBP0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 TIMM44O43615 452 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 CXCL13O43927 109 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 RP2O75695 350 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 GABARAPO95166 117 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 IGHDP01880 384 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 LGALS2P05162 132 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 FUT1P19526 365 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 AHCYP23526 432 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 RFC4P35249 363 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 HPCAL1P37235 193 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 PRRX1P54821 245 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 CDH4P55283 916 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 HSD17B7P56937 341 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 SLC26A5P58743 744 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 RPS21P63220 83 aaKnown RBP0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 FLI1Q01543 452 aaPredicted RBP0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 ACTN3Q08043 901 aaPredicted RBP0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 ERCC8Q13216 396 aa0.21□□□□□ -2.38
RNU2-55P-201ENST00000411146 AQP6Q13520 282 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms