RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 TRBV5-3A0A0A0MS03 114 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 A0A1W2PPZ6 126 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 NDUFS8O00217 210 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 IGLV1-44P01699 117 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 GPX2P18283 190 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 HTR2AP28223 471 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 GRPRP30550 384 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 NAAAQ02083 359 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 PAGE3Q5JUK9 113 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 LINGO2Q7L985 606 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 RANBP3LQ86VV4 465 aaPredicted RBP12.84□□□□□ -0.35
CBX3-203ENST00000409747 CCDC36Q8IYA8 594 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 HIPK4Q8NE63 616 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 TMEM27Q9HBJ8 222 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 SLAMF8Q9P0V8 285 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 KLHL14Q9P2G3 628 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 CDC42EP3Q9UKI2 254 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 ANGPT4Q9Y264 503 aa12.84□□□□□ -0.35
CBX3-203ENST00000409747 VSTM5A8MXK1 200 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 B9A039 149 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 GPRIN2O60269 458 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 IGKV3-15P01624 115 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 CECR9P0C854 216 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 NQO1P15559 274 aaKnown RBP12.83□□□□□ -0.36
CBX3-203ENST00000409747 USF1P22415 310 aaPredicted RBP12.83□□□□□ -0.36
CBX3-203ENST00000409747 PDLIM4P50479 330 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 AGKQ53H12 422 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 SWT1Q5T5J6 900 aaKnown RBP12.83□□□□□ -0.36
CBX3-203ENST00000409747 SLC46A3Q7Z3Q1 461 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 ARMC8Q8IUR7 673 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 UEVLDQ8IX04 471 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 SCAIQ8N9R8 606 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 NUP37Q8NFH4 326 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 SPATA3Q8NHX4 192 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 RNF217Q8TC41 542 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 STON2Q8WXE9 905 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 ASPNQ9BXN1 380 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 NELFAQ9H3P2 528 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 SLC52A3Q9NQ40 469 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 SEC14L4Q9UDX3 406 aa12.83□□□□□ -0.36
CBX3-203ENST00000409747 FBN1P35555 2871 aaKnown RBP12.83□□□□□ -0.36
CBX3-203ENST00000409747 IGKV1D-42A0A075B6H8 117 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 A0A087WUJ7 227 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 CBR1P16152 277 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 ARR3P36575 388 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 ARF1P84077 181 aaKnown RBP12.82□□□□□ -0.36
CBX3-203ENST00000409747 EFNB3Q15768 340 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 MST1LQ2TV78 715 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 C10orf111Q8N326 155 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 OR2M2Q96R28 347 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 CRLF2Q9HC73 371 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 GPR35Q9HC97 309 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 B3GAT2Q9NPZ5 323 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 TMEM160Q9NX00 188 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 ATRQ13535 2644 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 A0A0B4J2E0 115 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 A0A1B0GX12 115 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 TRAF3IP2O43734 574 aaPredicted RBP12.82□□□□□ -0.36
CBX3-203ENST00000409747 TPST1O60507 370 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 ERCC1P07992 297 aaPredicted RBP12.82□□□□□ -0.36
CBX3-203ENST00000409747 TUBA1BP68363 451 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 TUBA4AP68366 448 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 RBBP4Q09028 425 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 OR1Q1Q15612 314 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 CEACAM16Q2WEN9 425 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 CYB5R2Q6BCY4 276 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 TUBA1AQ71U36 451 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 COMTD1Q86VU5 262 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 SNX32Q86XE0 403 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 C11orf65Q8NCR3 313 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 IL17RDQ8NFM7 739 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 SLC41A3Q96GZ6 507 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 SORCS2Q96PQ0 1159 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 IKZF5Q9H5V7 419 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 ZNF442Q9H7R0 627 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 MXRA5Q9NR99 2828 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 LPAR3Q9UBY5 353 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 LEF1Q9UJU2 399 aaPredicted RBP12.82□□□□□ -0.36
CBX3-203ENST00000409747 TRIM33Q9UPN9 1127 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 USP22Q9UPT9 525 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 NOX1Q9Y5S8 564 aa12.82□□□□□ -0.36
CBX3-203ENST00000409747 ZNF99A8MXY4 864 aaPredicted RBP12.81□□□□□ -0.36
CBX3-203ENST00000409747 FMO6PO60774 539 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 OR4A8P0C604 315 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 AQP1P29972 269 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 PPOXP50336 477 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 LSM11P83369 360 aaKnown RBP eCLIP12.81□□□□□ -0.36
CBX3-203ENST00000409747 ADIPOQQ15848 244 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 GLIPR1L2Q4G1C9 344 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 VHLLQ6RSH7 139 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 TMEM123Q8N131 208 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 NANOS1Q8WY41 292 aaKnown RBP12.81□□□□□ -0.36
CBX3-203ENST00000409747 LRR1Q96L50 414 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 ANKRD27Q96NW4 1050 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 KCNK17Q96T54 332 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 VRK1Q99986 396 aaPredicted RBP12.81□□□□□ -0.36
CBX3-203ENST00000409747 CPPED1Q9BRF8 314 aaPredicted RBP12.81□□□□□ -0.36
CBX3-203ENST00000409747 TMEM43Q9BTV4 400 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 RAB1BQ9H0U4 201 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms