RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SCNM1Q9BWG6 230 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 ZNF350Q9GZX5 532 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 HINT3Q9NQE9 182 aaKnown RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 FKBP7Q9Y680 259 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 CREBBPQ92793 2442 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 ESPL1Q14674 2120 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 FABP12A6NFH5 140 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 KIAA0513O60268 411 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 INSM1Q01101 510 aaPredicted RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 RSPO4Q2I0M5 234 aaPredicted RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 TMEM44Q2T9K0 475 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 DCAF10Q5QP82 559 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 RPL13AP3Q6NVV1 102 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 PRSS42Q7Z5A4 293 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 SLC22A16Q86VW1 577 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 BPHLQ86WA6 291 aaPredicted RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 NTN4Q9HB63 628 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 HRH3Q9Y5N1 445 aa10.37□□□□□ -0.75
SNX13-202ENST00000409604 MTCL1Q9Y4B5 1905 aaKnown RBP10.37□□□□□ -0.75
SNX13-202ENST00000409604 CENPXA8MT69 81 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 NOS1APO75052 506 aaPredicted RBP10.36□□□□□ -0.75
SNX13-202ENST00000409604 SLITRK5O94991 958 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 CYB5AP00167 134 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 IGKV1D-16P01601 117 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 IGLV3-19P01714 112 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 CD14P08571 375 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 CALCBP10092 127 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 HLCSP50747 726 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 CAPZA1P52907 286 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 CLDN12P56749 244 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 TUBA1BP68363 451 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 TUBA4AP68366 448 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 EMX1Q04741 257 aaPredicted RBP10.36□□□□□ -0.75
SNX13-202ENST00000409604 MFSD13AQ14CX5 517 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 ZNF766Q5HY98 468 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 SLC18B1Q6NT16 456 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 C3orf33Q6P1S2 294 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 TUBA1AQ71U36 451 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 TIGD4Q8IY51 512 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 SAMD12Q8N8I0 201 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 LGALS12Q96DT0 336 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 VSTM2LQ96N03 204 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 PAIP2BQ9ULR5 123 aaKnown RBP10.36□□□□□ -0.75
SNX13-202ENST00000409604 GGT3PA6NGU5 568 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 ERGP11308 486 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 TSPAN5P62079 268 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 FMODQ06828 376 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 OR5J2Q8NH18 312 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 RAB2BQ8WUD1 216 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 EXTL1Q92935 676 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 MOGAT1Q96PD6 335 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 ZPBPQ9BS86 351 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 SLC22A11Q9NSA0 550 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 MED17Q9NVC6 651 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 SEC14L4Q9UDX3 406 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 CES1P1Q9UKY3 287 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 HS3ST3B1Q9Y662 390 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 TANC1Q9C0D5 1861 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 TMEM269A0A1B0GVZ9 245 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 PTHP01270 115 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 MSX1P28360 303 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 DAP3P51398 398 aaKnown RBP10.36□□□□□ -0.75
SNX13-202ENST00000409604 CSRP2Q16527 193 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 ZNF613Q6PF04 617 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 FAM57BQ71RH2 274 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 CALHM3Q86XJ0 350 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 SPARTQ8N0X7 666 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 OR8S1Q8NH09 359 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 CCDC120Q96HB5 630 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 A4GNTQ9UNA3 340 aa10.36□□□□□ -0.75
SNX13-202ENST00000409604 FAM25EA8MYX2 175 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 TBX6O95947 436 aaPredicted RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 HTR3AP46098 478 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 BMXP51813 675 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 MRPL28Q13084 256 aaKnown RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 PLAG1Q6DJT9 500 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 H1FNTQ75WM6 255 aaPredicted RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 SYT9Q86SS6 491 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 LIX1LQ8IVB5 337 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 PDCD1LG2Q9BQ51 273 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 ASH2LQ9UBL3 628 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 DHDHQ9UQ10 334 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 WIF1Q9Y5W5 379 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 FAM230AA0A1W2PPH8 454 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 TCRBV16S1A1N1A0A5B0 115 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 MAGEA5P43359 124 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 HTR5AP47898 357 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 CD97P48960 835 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 CSRP3P50461 194 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 POGLUT1Q8NBL1 392 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 C9orf43Q8TAL5 461 aaPredicted RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 TM4SF19Q96DZ7 209 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 SGCZQ96LD1 299 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 PRRX2Q99811 253 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 BCL2L10Q9HD36 194 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 MRPL39Q9NYK5 338 aaKnown RBP10.35□□□□□ -0.75
SNX13-202ENST00000409604 ING4Q9UNL4 249 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 FER1L5A0AVI2 2057 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
SNX13-202ENST00000409604 LOC101059948A0A1B0GTJ6 334 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms