RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 C16orf87Q6PH81 154 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 SLC44A2Q8IWA5 706 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 PHC2Q8IXK0 858 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 LINC00471Q8N535 108 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 OR7G1Q8NGA0 311 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 NDNFQ8TB73 568 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 GTPBP3Q969Y2 492 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 BTBD2Q9BX70 525 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 CDCA4Q9BXL8 241 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 ZCCHC3Q9NUD5 404 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 CLN6Q9NWW5 311 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 REV1Q9UBZ9 1251 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 CES1P1Q9UKY3 287 aa11.37□□□□□ -0.59
CHRNA1-205ENST00000409542 PRR14LQ5THK1 2151 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 PCNX3Q9H6A9 2034 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 TRBV4-1A0A0J9YWV2 114 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 PRAMEF27A3QJZ7 478 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 M0R082 166 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 PFDN1O60925 122 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 CBX7O95931 251 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 THBDP07204 575 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 NR2F1P10589 423 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 POU2F1P14859 743 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 PORP16435 677 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 CSNK2A2P19784 350 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 SRD5A2P31213 254 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 CRISP3P54108 245 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 UGT2B15P54855 530 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 B3GALT5-AS1P59052 145 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 VBP1P61758 197 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 SNRPGP62308 76 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 TUBA1BP68363 451 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 PLCXD2Q0VAA5 305 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 SNTA1Q13424 505 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 TNK1Q13470 666 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 SYPL1Q16563 259 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 TIGD6Q17RP2 521 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 TRMT12Q53H54 448 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 TMEM201Q5SNT2 666 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 C12orf73Q69YU5 71 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 C20orf204Q6ZNR8 217 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 TUBA1AQ71U36 451 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 ZNF367Q7RTV3 350 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 SLC46A3Q7Z3Q1 461 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 ADCK1Q86TW2 530 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 PLCZ1Q86YW0 608 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 STX19Q8N4C7 294 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 ZNF610Q8N9Z0 462 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 CHPT1Q8WUD6 406 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 LGALS12Q96DT0 336 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 LCORQ96JN0 433 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 SFXN2Q96NB2 322 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 RSPO3Q9BXY4 272 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 ANKRA2Q9H9E1 313 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 MAT2BQ9NZL9 334 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 RHCGQ9UBD6 479 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 OSGIN1Q9UJX0 560 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 CORINQ9Y5Q5 1042 aa11.36□□□□□ -0.59
CHRNA1-205ENST00000409542 hCG_2014768A0A024R1R8 64 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 A0A0G2JPF8 293 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 A0A1W2PRQ8 180 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 EFCAB9A8MZ26 197 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 HNRNPCL2B2RXH8 293 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 HNRNPCL3B7ZW38 293 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 KLF4O43474 513 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 SOX30O94993 753 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 HNRNPCL4P0DMR1 293 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 FUT4P22083 530 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 C21orf33P30042 268 aaPredicted RBP11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 LIPAP38571 399 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 FEN1P39748 380 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 SLC15A1P46059 708 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 PCYT1AP49585 367 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 SUCLG1P53597 346 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 MAP4K2Q12851 820 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 SEC23BQ15437 767 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 LTB4RQ15722 352 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 SLC48A1Q6P1K1 146 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 CD300LDQ6UXZ3 194 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 DEF8Q6ZN54 512 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 PLEKHM3Q6ZWE6 761 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 P4HA3Q7Z4N8 544 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 IGFN1Q86VF2 1251 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 OR52R1Q8NGF1 315 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 OR4D11Q8NGI4 311 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 OR6Q1Q8NGQ2 317 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 ZNF675Q8TD23 568 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 XAGE5Q8WWM1 108 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 CNRIP1Q96F85 164 aaPredicted RBP11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 GIMAP4Q9NUV9 329 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 ERGIC3Q9Y282 383 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 SLC9A8Q9Y2E8 581 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 A3GALT2U3KPV4 340 aa11.35□□□□□ -0.59
CHRNA1-205ENST00000409542 RNF212BA8MTL3 300 aa11.34□□□□□ -0.59
CHRNA1-205ENST00000409542 C16orf97H3BN30 126 aa11.34□□□□□ -0.59
CHRNA1-205ENST00000409542 J3QRK9 145 aa11.34□□□□□ -0.59
CHRNA1-205ENST00000409542 EMC8O43402 210 aa11.34□□□□□ -0.59
CHRNA1-205ENST00000409542 AIREO43918 545 aa11.34□□□□□ -0.59
CHRNA1-205ENST00000409542 UGT2B17O75795 530 aa11.34□□□□□ -0.59
CHRNA1-205ENST00000409542 SULT1C4O75897 302 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms