RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 REP15Q6BDI9 236 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 MDP1Q86V88 176 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 PKP2Q99959 881 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 SYT3Q9BQG1 590 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 PIF1Q9H611 641 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 ZMAT3Q9HA38 289 aaKnown RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 CRLF2Q9HC73 371 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 EXOSC3Q9NQT5 275 aaKnown RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 OXSMQ9NWU1 459 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 MYEF2Q9P2K5 600 aaKnown RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 LIPT2A6NK58 231 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 CLDN24A6NM45 220 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 LSM1O15116 133 aaKnown RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 NEFHP12036 1026 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 NR4A1P22736 598 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 ARR3P36575 388 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 P2RY4P51582 365 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 POLR2HP52434 150 aaKnown RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 MRPS11P82912 194 aaKnown RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 ROR2Q01974 943 aaKnown RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 CEACAM7Q14002 265 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 OR7A5Q15622 319 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 CHI3L2Q15782 390 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 AP1ARQ63HQ0 302 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 FAM91A1Q658Y4 838 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 NIPAL3Q6P499 406 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 RBMS3Q6XE24 437 aaKnown RBP11□□□□□ -0.65
CHRNA1-203ENST00000409219 DOK3Q7L591 496 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 HMGN2P46Q86SG4 172 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 LRP11Q86VZ4 500 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 PMM1Q92871 262 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 MOAP1Q96BY2 351 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 RAB39BQ96DA2 213 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 SIKE1Q9BRV8 207 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 TUBB1Q9H4B7 451 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 NPHS2Q9NP85 383 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 THAP1Q9NVV9 213 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 TMED5Q9Y3A6 229 aa11□□□□□ -0.65
CHRNA1-203ENST00000409219 RYR3Q15413 4870 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 TMEM229AB2RXF0 380 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 G3V2L1 256 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 IGHV2-5P01817 119 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 GPIP06744 558 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 RNASE1P07998 156 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 MDKP21741 143 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 MATN1P21941 496 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 TACR3P29371 465 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 GCH1P30793 250 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 SOAT1P35610 550 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 ARF1P84077 181 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 MVKQ03426 396 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 STX3Q13277 289 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 TYW3Q6IPR3 259 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 CREB3L2Q70SY1 520 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 ASRGL1Q7L266 308 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 OIT3Q8WWZ8 545 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 MECRQ9BV79 373 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 LINC00470Q9BZP3 86 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 MYLK2Q9H1R3 596 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 ZNF385DQ9H6B1 395 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 C7orf69Q9H7B7 122 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 SAR1AQ9NR31 198 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 FIS1Q9Y3D6 152 aa10.99□□□□□ -0.65
CHRNA1-203ENST00000409219 DUXAA6NLW8 204 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 HNRNPCL1O60812 293 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 SEC14L2O76054 403 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 SERPINE1P05121 402 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 NAT2P11245 290 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 GATA3P23771 443 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 MAGEB1P43366 347 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 HBA1P69905 142 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 FUT5Q11128 374 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 PCLAFQ15004 111 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 ZYG11AQ6WRX3 759 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 FRRS1Q6ZNA5 592 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 RNF165Q6ZSG1 346 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 C16orf62Q7Z3J2 963 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 EPHX4Q8IUS5 362 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 CLEC4FQ8N1N0 589 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 SYT14Q8NB59 555 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 IL17RDQ8NFM7 739 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 CNOT9Q92600 299 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 ZG16BQ96DA0 208 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 CCDC126Q96EE4 140 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 THOC1Q96FV9 657 aaKnown RBP10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 ZNF48Q96MX3 618 aaPredicted RBP10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 MID2Q9UJV3 735 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 FZR1Q9UM11 496 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 WDR45Q9Y484 360 aa10.98□□□□□ -0.65
CHRNA1-203ENST00000409219 RPL36A-HNRNPH2H7BZ11 118 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 CFLARO15519 480 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 CDC14BO60729 498 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 LINC00032P0C843 101 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 GLRXP35754 106 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 RPL3P39023 403 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 MAP2K6P52564 334 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 NAA20P61599 178 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 KCNJ10P78508 379 aa10.97□□□□□ -0.65
CHRNA1-203ENST00000409219 SRSF4Q08170 494 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms