RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 NRG4Q8WWG1 115 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SGCZQ96LD1 299 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF583Q96ND8 569 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 GPR62Q9BZJ7 368 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SERTAD4Q9NUC0 356 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 RICTORQ6R327 1708 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 CICQ96RK0 1608 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 DNAJC25-GNG10A0A024R161 153 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ST8SIA3O43173 380 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 FURINP09958 794 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 GCSHP23434 173 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SLC5A2P31639 672 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR1D4P47884 311 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 MRPL19P49406 292 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 EGR3Q06889 387 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 MFAP5Q13361 173 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 NKPD1Q17RQ9 610 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SLC5A12Q1EHB4 618 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF620Q6ZNG0 422 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 RPS27LQ71UM5 84 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SCD5Q86SK9 330 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF611Q8N823 705 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZFP41Q8N8Y5 198 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 NHLRC2Q8NBF2 726 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR13C8Q8NGS7 320 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OLIG1Q8TAK6 271 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 IL17FQ96PD4 163 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 HINT2Q9BX68 163 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 MS4A8Q9BY19 250 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 METTL17Q9H7H0 456 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SPHK1Q9NYA1 384 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 GPR52Q9Y2T5 361 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 FEZF1A0PJY2 475 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 PTGESO14684 152 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 FADS1O60427 444 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 CTNSO60931 367 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 MRPL33O75394 65 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SLC10A3P09131 477 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF865P0CJ78 1059 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 CBLP22681 906 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SUMO3P55854 103 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SEC61A1P61619 476 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SOX4Q06945 474 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 BAMBIQ13145 260 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ENDOGQ14249 297 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 PNLIPRP3Q17RR3 467 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SLC35G1Q2M3R5 365 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 TIGITQ495A1 244 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 LYPD4Q6UWN0 246 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 Q6ZTK2 550 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ACOT7LQ6ZUV0 252 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 FCRLAQ7L513 359 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 VRK3Q8IV63 474 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 NAXDQ8IW45 347 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 NANOGP1Q8N7R0 232 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 CLEC1AQ8NC01 280 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF480Q8WV37 535 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 CDS1Q92903 461 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SLC25A46Q96AG3 418 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 LCORQ96JN0 433 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 FER1L6-AS2Q96M78 137 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 KIR3DX1Q9H7L2 352 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 PRDM9Q9NQV7 894 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 KCND3Q9UK17 655 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 POLDIP2Q9Y2S7 368 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 CBY1Q9Y3M2 126 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 PCDHGA6Q9Y5G7 932 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 TIAM2Q8IVF5 1701 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 A0A1B0GUH1 482 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 A0A1W2PPK0 400 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SLC35F4A4IF30 521 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 UMAD1C9J7I0 102 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 LINC01387J3KSC0 135 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ACOT8O14734 319 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ANGPTL7O43827 346 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF26P17031 533 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 EPHA5P54756 1037 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 WNT7BP56706 349 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 UBE2G2P60604 165 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 RPS26P62854 115 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 SORDQ00796 357 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 IL10RAQ13651 578 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR7A5Q15622 319 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 CCL14Q16627 93 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 FAM26DQ5JW98 314 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 LDLRAD1Q5T700 205 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 MOB3CQ70IA8 216 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ARHGEF39Q8N4T4 335 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR5H6Q8NGV6 325 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 OR2AE1Q8NHA4 323 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ANGPTL6Q8NI99 470 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 EMG1Q92979 244 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 DCLRE1CQ96SD1 692 aaKnown RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 BCL2L10Q9HD36 194 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 NDRG3Q9UGV2 375 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 ZNF391Q9UJN7 358 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 B3GALT5Q9Y2C3 310 aa5.66□□□□□ -1.5
SCN1A-203ENST00000409050 GPR55Q9Y2T6 319 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-203ENST00000409050 NUP188Q5SRE5 1749 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms