RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MMABQ96EY8 250 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-202ENST00000409031 EXOSC3Q9NQT5 275 aaKnown RBP16.36■□□□□ 0.21
SMPD4-202ENST00000409031 FKTNO75072 461 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 OR2C1O95371 312 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 PRPH2P23942 346 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 MFGE8Q08431 387 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-202ENST00000409031 HLXQ14774 488 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-202ENST00000409031 TEAD2Q15562 447 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF628Q5EBL2 1059 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 NIPAL3Q6P499 406 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 MS4A8Q9BY19 250 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 TMEM189-UBE2V1I3L0A0 370 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 BCL2L11O43521 198 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 SLC6A1P30531 599 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 SLC6A8P48029 635 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 SLC6A12P48065 614 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 COX15Q7KZN9 410 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 WDR89Q96FK6 387 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-202ENST00000409031 SLC41A2Q96JW4 573 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 KLF16Q9BXK1 252 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-202ENST00000409031 FTSJ1Q9UET6 329 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 V9GYH0 126 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 IFITM5A6NNB3 132 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 CCSO14618 274 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 OR2T1O43869 369 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 OR7E24Q6IFN5 339 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 CMTM1Q8IZ96 169 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 SYS1Q8N2H4 156 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 OR13C9Q8NGT0 318 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 ADAMTS18Q8TE60 1221 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 JSRP1Q96MG2 331 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-202ENST00000409031 SAMD10Q9BYL1 202 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 PTGES2Q9H7Z7 377 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 TMEM269A0A1B0GVZ9 245 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 ACY1Q03154 408 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 TLE4Q04727 773 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 PLCXD2Q0VAA5 305 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 ST3GAL2Q16842 350 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 IAH1Q2TAA2 248 aaPredicted RBP16.35■□□□□ 0.21
SMPD4-202ENST00000409031 JTBO76095 146 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 SLCO2B1O94956 709 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF136P52737 540 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 RPL23AP62750 156 aaKnown RBP16.35■□□□□ 0.21
SMPD4-202ENST00000409031 PRDX1Q06830 199 aaKnown RBP16.35■□□□□ 0.21
SMPD4-202ENST00000409031 FIGLAQ6QHK4 219 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 SEMA4CQ9C0C4 833 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 TOLLIPQ9H0E2 274 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 TMEM231Q9H6L2 316 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 CMC2Q9NRP2 79 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF98A6NK75 572 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 NAGAP17050 411 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 ITGB7P26010 798 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 ZC3H14Q6PJT7 736 aaKnown RBP16.35■□□□□ 0.21
SMPD4-202ENST00000409031 LYPD8Q6UX82 237 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 LIPIQ6XZB0 460 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 VRK3Q8IV63 474 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF740Q8NDX6 193 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 GAR1Q9NY12 217 aaKnown RBP16.35■□□□□ 0.21
SMPD4-202ENST00000409031 CSAG2Q9Y5P2 127 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 RFPL4AA6NLU0 287 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 RFPL4AL1F8VTS6 287 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 TGOLN2O43493 480 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 GPR137BO60478 399 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 SLC16A7O60669 478 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 SQSTM1Q13501 440 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 TECPR1Q7Z6L1 1165 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 HHIPL1Q96JK4 782 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 AUNIPQ9H7T9 357 aa16.35■□□□□ 0.21
SMPD4-202ENST00000409031 AIFM1O95831 613 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 ACHEP22303 614 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 SEC13P55735 322 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 OPN5Q6U736 354 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 FBXW12Q6X9E4 464 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 MEX3BQ6ZN04 569 aaKnown RBP16.34■□□□□ 0.21
SMPD4-202ENST00000409031 NKAIN4Q8IVV8 208 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 LINC00052Q96N35 136 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 NMNAT3Q96T66 252 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 CWH43Q9H720 699 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 SPACA1Q9HBV2 294 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 TRAV1-2A0A0B4J238 106 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 C17orf113A0A1B0GUU1 675 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 CYTIPO60759 359 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 HBQ1P09105 142 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 C1SP09871 688 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 EPXP11678 715 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF266Q14584 549 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 SLC22A6Q4U2R8 563 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 SPICQ8N5J4 248 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 FAM71F1Q96KD3 344 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-202ENST00000409031 C20orf24Q9BUV8 137 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 PRR14Q9BWN1 585 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 CXCL16Q9H2A7 254 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 FN3KRPQ9HA64 309 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 ADH1BP00325 375 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 RAB4BP61018 213 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 CRHR2Q13324 411 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 DPY19L2P2Q6ZN68 376 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 ADGRE4PQ86SQ3 457 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 OR56B1Q8NGI3 324 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 DTD2Q96FN9 168 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms