RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 HSPB2A8KAH6 182 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 KLF11O14901 512 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 SGCEO43556 437 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 NPHS1O60500 1241 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 SOX30O94993 753 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 IGHV2-70P01814 119 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 OPN1MWP04001 364 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 LCKP06239 509 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 FCER2P06734 321 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 BPGMP07738 259 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 FGF4P08620 206 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 H2AFB1P0C5Y9 115 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 OPN1MW2P0DN77 364 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 OPN1MW3P0DN78 364 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 SAGP10523 405 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 BMP4P12644 408 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 ZNF250P15622 560 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 CAPN3P20807 821 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 PNLIPRP2P54317 469 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 PRKAG1P54619 331 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 CLDN15P56746 228 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 CLDN18P56856 261 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 MYBPHQ13203 477 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 PDE7AQ13946 482 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 EFR3AQ14156 821 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 HSPB2Q16082 182 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 SLC25A35Q3KQZ1 300 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 XKR7Q5GH72 579 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 ARMCX4Q5H9R4 360 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 MARCH3Q86UD3 253 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 IFNEQ86WN2 208 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 RNF113BQ8IZP6 322 aaKnown RBP8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 KRTCAP2Q8N6L1 136 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 FADS6Q8N9I5 356 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 OR2M3Q8NG83 312 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 RFKQ969G6 155 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 CMTM5Q96DZ9 223 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 RADILQ96JH8 1075 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 DACH2Q96NX9 599 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 OR5M11Q96RB7 305 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 YIPF4Q9BSR8 244 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 LMF2Q9BU23 707 aaKnown RBP8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 TRMOQ9BU70 441 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 MND1Q9BWT6 205 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 DSN1Q9H410 356 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 REEP4Q9H6H4 257 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 UNKLQ9H9P5 680 aaKnown RBP8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 CCM2LQ9NUG4 571 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 PAK1IP1Q9NWT1 392 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 CRIM1Q9NZV1 1036 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 SH3BP4Q9P0V3 963 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 NDRG3Q9UGV2 375 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 CBLCQ9ULV8 474 aa8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 PRPF19Q9UMS4 504 aaKnown RBP8.72□□□□□ -1.01
NIF3L1-202ENST00000409020 DNHD1Q96M86 4753 aa8.71□□□□□ -1.01
NIF3L1-202ENST00000409020 SVEP1Q4LDE5 3571 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 MBD3L4A6NDZ8 208 aaPredicted RBP8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 MBD3L3A6NE82 208 aaPredicted RBP8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 MBD3L5A6NJ08 208 aaPredicted RBP8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 CD8B2A6NJW9 211 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 CLCA1A8K7I4 914 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 TNFRSF21O75509 655 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 UGT2B17O75795 530 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 ACTL6AO96019 429 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 ACP2P11117 423 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 CPN1P15169 458 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 TCN1P20061 433 aaPredicted RBP8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 DPP4P27487 766 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 SRD5A2P31213 254 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 GABRA3P34903 492 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 TIMP3P35625 211 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 MAP3K8P41279 467 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 FRKP42685 505 aaPredicted RBP8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 UGT2B15P54855 530 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 CARD18P57730 90 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 INTS11Q5TA45 600 aaKnown RBP8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 RNF165Q6ZSG1 346 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 PRSS48Q7RTY5 328 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 C16orf62Q7Z3J2 963 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 SZRD1Q7Z422 152 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 ADGRE4PQ86SQ3 457 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 TMEM200AQ86VY9 491 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 GCNT2Q8N0V5 402 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 ZNF511Q8NB15 262 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 SLC24A4Q8NFF2 622 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 OR7A2PQ8NGA2 310 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 MBD3L2Q8NHZ7 208 aaPredicted RBP8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 POC1BQ8TC44 478 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 ZFP90Q8TF47 636 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 DUSP19Q8WTR2 217 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 PROX1Q92786 737 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 PPCDCQ96CD2 204 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 PPP1R36Q96LQ0 422 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 SFXN2Q96NB2 322 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 ZNF559Q9BR84 538 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 TCEAL7Q9BRU2 100 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 C20orf27Q9GZN8 174 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 NMUR2Q9GZQ4 415 aa8.71□□□□□ -1.02
NIF3L1-202ENST00000409020 LIME1Q9H400 295 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms