RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NOP16Q9Y3C1 178 aaKnown RBP11.73□□□□□ -0.53
HERC3-203ENST00000407637 CD3DP04234 171 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 ADH1AP07327 375 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 CSF1P09603 554 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 LIPCP11150 499 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 GLP1RP43220 463 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 CAV2P51636 162 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 PRKAG1P54619 331 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 FXYD6P3P58550 94 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 TBPL1P62380 186 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 COL9A2Q14055 689 aaPredicted RBP11.73□□□□□ -0.53
HERC3-203ENST00000407637 ADGRF1Q5T601 910 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 DHRS11Q6UWP2 260 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 RHOUQ7L0Q8 258 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 DPPA2Q7Z7J5 298 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 ETFBKMTQ8IXQ9 262 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 OR4K14Q8NGD5 310 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 RGP1Q92546 391 aaPredicted RBP11.73□□□□□ -0.53
HERC3-203ENST00000407637 MIB2Q96AX9 1013 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 DPH1Q9BZG8 443 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 KATNBL1Q9H079 304 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 CACFD1Q9UGQ2 172 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 V9GY05 133 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 IGLV3-16A0A075B6K0 115 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 A0A087X0M5 115 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 A0A1B0GX30 115 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 OR2AG2A6NM03 316 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 MCIDASD6RGH6 385 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 OGG1O15527 345 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 FAM157CP0CG43 387 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 AKAIN1P0CW23 69 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 ATP1B2P14415 290 aaPredicted RBP11.73□□□□□ -0.53
HERC3-203ENST00000407637 PGAM2P15259 253 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 EDNRAP25101 427 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 CD34P28906 385 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 PSMB10P40306 273 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 AP1S1P61966 158 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 FOXK2Q01167 660 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 FNDC3BQ53EP0 1204 aaKnown RBP11.73□□□□□ -0.53
HERC3-203ENST00000407637 PPP1R3BQ86XI6 285 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 BAP18Q8IXM2 172 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 ARL6IP6Q8N6S5 226 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 SUN3Q8TAQ9 357 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 CCDC107Q8WV48 283 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 AKR1E2Q96JD6 320 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 SUSD3Q96L08 255 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 TGM7Q96PF1 710 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 NRSN2Q9GZP1 204 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 TRPV4Q9HBA0 871 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 SLC13A4Q9UKG4 626 aa11.73□□□□□ -0.53
HERC3-203ENST00000407637 SPTBP11277 2137 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 GOLGA4Q13439 2230 aaKnown RBP11.72□□□□□ -0.53
HERC3-203ENST00000407637 GXYLT2A0PJZ3 443 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 BHLHE40O14503 412 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 IFNA2P01563 188 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 S100A2P29034 98 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 CD80P33681 288 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 PMELP40967 661 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 HTRA4P83105 476 aaPredicted RBP11.72□□□□□ -0.53
HERC3-203ENST00000407637 GAMTQ14353 236 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 DECR1Q16698 335 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 AWAT1Q58HT5 328 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 PRAMEF17Q5VTA0 474 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 PRSS55Q6UWB4 352 aaPredicted RBP11.72□□□□□ -0.53
HERC3-203ENST00000407637 CLEC9AQ6UXN8 241 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 DNM1P46Q6ZS02 220 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 MBOAT2Q6ZWT7 520 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 CBARPQ8N350 705 aaPredicted RBP11.72□□□□□ -0.53
HERC3-203ENST00000407637 FAM24BQ8N5W8 94 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 SLC30A7Q8NEW0 376 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 IP6K3Q96PC2 410 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 TAAR9Q96RI9 348 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 SUCNR1Q9BXA5 334 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 CHST5Q9GZS9 411 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 SEMA6CQ9H3T2 930 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 ITGB2P05107 769 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 AQP2P41181 271 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 PRKXP51817 358 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 DHRS2Q13268 280 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 ERV3-1Q14264 604 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 SURF2Q15527 256 aaPredicted RBP11.72□□□□□ -0.53
HERC3-203ENST00000407637 ZNF239Q16600 458 aaKnown RBP11.72□□□□□ -0.53
HERC3-203ENST00000407637 LRRC73Q5JTD7 316 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 FAM111BQ6SJ93 734 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 TAS1R1Q7RTX1 841 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 GDF7Q7Z4P5 450 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 PAQR4Q8N4S7 273 aaPredicted RBP11.72□□□□□ -0.53
HERC3-203ENST00000407637 OR52L1Q8NGH7 329 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 OR2G2Q8NGZ5 317 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 ZG16BQ96DA0 208 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 C20orf24Q9BUV8 137 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 C1QTNF2Q9BXJ5 285 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 TEX101Q9BY14 249 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 ZCCHC2Q9C0B9 1178 aaKnown RBP11.72□□□□□ -0.53
HERC3-203ENST00000407637 FN3KRPQ9HA64 309 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 ZCCHC3Q9NUD5 404 aaKnown RBP11.72□□□□□ -0.53
HERC3-203ENST00000407637 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 GNG8Q9UK08 70 aa11.72□□□□□ -0.53
HERC3-203ENST00000407637 MDC1Q14676 2089 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms