RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 VASH1Q7L8A9 365 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GALNTL5Q7Z4T8 443 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SPRED2Q7Z698 418 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ARIH2OSQ8N7S6 290 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 INO80EQ8NBZ0 244 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SIMC1Q8NDZ2 872 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 OR1N1Q8NGS0 311 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF431Q8TF32 576 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 Q96M85 177 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 THAP7Q9BT49 309 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 OR2B2Q9GZK3 357 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM185BQ9H7F4 350 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC52A3Q9NQ40 469 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 POLE4Q9NR33 117 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 FBXO8Q9NRD0 319 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ATXN7L1Q9ULK2 861 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 YARS2Q9Y2Z4 477 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 NOP16Q9Y3C1 178 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CACNG2Q9Y698 323 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TRAV6A0A075B6T7 132 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SULT1B1O43704 296 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 RAF1P04049 648 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 BMP1P13497 986 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 APEHP13798 732 aaKnown RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ATF4P18848 351 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 THBS2P35442 1172 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GPR85P60893 370 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CDK5Q00535 292 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TGFBR3Q03167 851 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SELENBP1Q13228 472 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 COL28A1Q2UY09 1125 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 HLA-BQ31612 363 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 VWA2Q5GFL6 755 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC25A25Q6KCM7 469 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 OVCH1Q7RTY7 1134 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TIGD4Q8IY51 512 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF565Q8N9K5 539 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SCARF2Q96GP6 870 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC25A44Q96H78 314 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 MRGPRX4Q96LA9 322 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 SGCZQ96LD1 299 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CCDC74BQ96LY2 380 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CHIAQ9BZP6 476 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 WWTR1Q9GZV5 400 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 IRF2BPLQ9H1B7 796 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 DUSP15Q9H1R2 295 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CHST11Q9NPF2 352 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 C12orf4Q9NQ89 552 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 NLKQ9UBE8 527 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 CLEC2DQ9UHP7 191 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 GLS2Q9UI32 602 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 MUTYHQ9UIF7 546 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 KCNG2Q9UJ96 466 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 KCNIP3Q9Y2W7 256 aa4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM184BQ9Y519 407 aaPredicted RBP4.35□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A087WUJ7 227 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A0B4J2E0 115 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 CCDC163A0A0D9SF12 145 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A1B0GX12 115 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 KANTRA0A1W2PQU2 76 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 KRBA1A5PL33 1030 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 H3BSH0 61 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 L7N2F9 121 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 ARPC3O15145 178 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 HPGDSO60760 199 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 UBL3O95164 117 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 DDAH2O95865 285 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 LCATP04180 440 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 CSN2P05814 226 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 UBCP0CG48 685 aaKnown RBP4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 IL7P13232 177 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 TCN2P20062 427 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 CCNOP22674 350 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 VAMP1P23763 118 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 CD97P48960 835 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 ARG2P78540 354 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 MEF2DQ14814 521 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 CNN3Q15417 329 aaKnown RBP4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 SWI5Q1ZZU3 235 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 PRTGQ2VWP7 1150 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 CHRFAM7AQ494W8 412 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 UBE2NLQ5JXB2 153 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 METTL11BQ5VVY1 283 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 OR5M10Q6IEU7 315 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 PRSS42Q7Z5A4 293 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 TMED4Q7Z7H5 227 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 ZSCAN4Q8NAM6 433 aaPredicted RBP4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 CCDC54Q8NEL0 328 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 DYNC2LI1Q8TCX1 351 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 MED18Q9BUE0 208 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 NRSN2Q9GZP1 204 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 ENKD1Q9H0I2 346 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 EXOSC3Q9NQT5 275 aaKnown RBP4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 PLEK2Q9NYT0 353 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 TAS2R16Q9NYV7 291 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 B3GALT5Q9Y2C3 310 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 KCNE3Q9Y6H6 103 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 PMF1-BGLAPU3KQ54 211 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 ANK1P16157 1881 aa4.34□□□□□ -1.71
PCDH11X-207ENST00000406881 MIA3Q5JRA6 1907 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms