RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SLC19A3Q9BZV2 496 aa23.33■■□□□ 1.32
COL13A1-203ENST00000398969 KLK11Q9UBX7 282 aa23.33■■□□□ 1.32
COL13A1-203ENST00000398969 OR5V1Q9UGF6 321 aa23.33■■□□□ 1.32
COL13A1-203ENST00000398969 FOXJ3Q9UPW0 622 aa23.33■■□□□ 1.32
COL13A1-203ENST00000398969 SHOXO15266 292 aa23.32■■□□□ 1.32
COL13A1-203ENST00000398969 RNH1P13489 461 aaKnown RBP23.32■■□□□ 1.32
COL13A1-203ENST00000398969 GPR3P46089 330 aa23.32■■□□□ 1.32
COL13A1-203ENST00000398969 SLC6A19Q695T7 634 aa23.32■■□□□ 1.32
COL13A1-203ENST00000398969 SLC22A18ASQ8N1D0 253 aa23.32■■□□□ 1.32
COL13A1-203ENST00000398969 SYNPRQ8TBG9 265 aa23.32■■□□□ 1.32
COL13A1-203ENST00000398969 FCAMRQ8WWV6 532 aa23.32■■□□□ 1.32
COL13A1-203ENST00000398969 CLEC4MQ9H2X3 399 aaPredicted RBP23.32■■□□□ 1.32
COL13A1-203ENST00000398969 SEMA6CQ9H3T2 930 aa23.32■■□□□ 1.32
COL13A1-203ENST00000398969 GLTPQ9NZD2 209 aa23.32■■□□□ 1.32
COL13A1-203ENST00000398969 ZNF346Q9UL40 294 aaKnown RBP23.32■■□□□ 1.32
COL13A1-203ENST00000398969 OR10H1Q9Y4A9 318 aa23.32■■□□□ 1.32
COL13A1-203ENST00000398969 SULT1B1O43704 296 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 CTNSO60931 367 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 PGDP52209 483 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 IGLV3-21P80748 117 aaPredicted RBP23.31■■□□□ 1.32
COL13A1-203ENST00000398969 EXOSC2Q13868 293 aaKnown RBP23.31■■□□□ 1.32
COL13A1-203ENST00000398969 C16orf52Q8NHV5 167 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 PIGKQ92643 395 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 S100A16Q96FQ6 103 aaKnown RBP23.31■■□□□ 1.32
COL13A1-203ENST00000398969 MAP6Q96JE9 813 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 RADILQ96JH8 1075 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 PRO3102Q9H379 93 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 TNRC18O15417 2968 aaPredicted RBP23.31■■□□□ 1.32
COL13A1-203ENST00000398969 KIR2DS5A0A0G2JLQ3 304 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 A0A0G2JNG1 304 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 A0A1B0GUH1 482 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 BLOC1S5-TXNDC5H3BN57 136 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 KIR2DS3K7RE56 304 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 MBTPS2O43462 519 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 KHDRBS3O75525 346 aaKnown RBP23.31■■□□□ 1.32
COL13A1-203ENST00000398969 RPP14O95059 124 aaKnown RBP23.31■■□□□ 1.32
COL13A1-203ENST00000398969 AQP2P41181 271 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 ERV3-1Q14264 604 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 KIR2DS5Q14953 304 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 ZNF542PQ5EBM4 170 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 APOOLQ6UXV4 268 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 FAM71CQ8NEG0 241 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 TSSK2Q96PF2 358 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 KLHDC2Q9Y2U9 406 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 CLDN16Q9Y5I7 305 aa23.31■■□□□ 1.32
COL13A1-203ENST00000398969 HEATR5AQ86XA9 2040 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 OR2W5A6NFC9 320 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 TOXO94900 526 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 IFNA7P01567 189 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 OR8G3PP0DMU2 310 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 BTG2P78543 158 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 POU4F3Q15319 338 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 TMEM69Q5SWH9 247 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 METTL11BQ5VVY1 283 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 STAC2Q6ZMT1 411 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 SLC16A9Q7RTY1 509 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 JAZF1Q86VZ6 243 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 HMGB4Q8WW32 186 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 DGAT2Q96PD7 388 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 POMT2Q9UKY4 750 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 ERVK-19Q9WJR5 959 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 RPS10-NUDT3A0A1W2PQS6 291 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 ARPC1BO15143 372 aaKnown RBP23.3■■□□□ 1.32
COL13A1-203ENST00000398969 RAB40ALP0C0E4 278 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 CALCBP10092 127 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 LCN1P31025 176 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 BLVRAP53004 296 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 RPS15P62841 145 aaKnown RBP23.3■■□□□ 1.32
COL13A1-203ENST00000398969 MAT1AQ00266 395 aaKnown RBP23.3■■□□□ 1.32
COL13A1-203ENST00000398969 RPL6Q02878 288 aaKnown RBP23.3■■□□□ 1.32
COL13A1-203ENST00000398969 FAM122BQ7Z309 247 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 EXD3Q8N9H8 876 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 AVL9Q8NBF6 648 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 RAB40AQ8WXH6 277 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 MRI1Q9BV20 369 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 NPDC1Q9NQX5 325 aaPredicted RBP23.3■■□□□ 1.32
COL13A1-203ENST00000398969 PRTFDC1Q9NRG1 225 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 EML5Q05BV3 1969 aa23.3■■□□□ 1.32
COL13A1-203ENST00000398969 ANKRD20A5PA0PJZ0 165 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 TMEM72A0PK05 275 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 ZSCAN5BA6NJL1 495 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 UPK3AO75631 287 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 ENPP1P22413 925 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 GRK6P43250 576 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 P2RX1P51575 399 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 SLC25A1P53007 311 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 Q499Y3 187 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 OLFML2AQ68BL7 652 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 MCATQ8IVS2 390 aaKnown RBP23.29■■□□□ 1.32
COL13A1-203ENST00000398969 C1orf216Q8TAB5 229 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 LCORQ96JN0 433 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-203ENST00000398969 OR10A5Q9H207 317 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 MRM2Q9UI43 246 aaKnown RBP23.29■■□□□ 1.32
COL13A1-203ENST00000398969 MRPS33Q9Y291 106 aaKnown RBP23.29■■□□□ 1.32
COL13A1-203ENST00000398969 HIF3AQ9Y2N7 669 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 ELOA3DA6NLF2 546 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-203ENST00000398969 TACSTD2P09758 323 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 PTHLHP12272 177 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 PUDPQ08623 228 aa23.29■■□□□ 1.32
COL13A1-203ENST00000398969 SMAD4Q13485 552 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms