RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ADAM18Q9Y3Q7 739 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 C17orf105B2RV13 164 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 GPR89AB7ZAQ6 455 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM150CB9EJG8 249 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ALX3O95076 343 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 GPR89BP0CG08 455 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RAB6AP20340 208 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 GNALP38405 381 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 GZMKP49863 264 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 POU4F2Q12837 409 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 DUSP8Q13202 625 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 SMAD2Q15796 467 aaKnown RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RNLSQ5VYX0 342 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RTL10Q7L3V2 364 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 IL17RCQ8NAC3 791 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 PTP4A1Q93096 173 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MARC2Q969Z3 335 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 NKX3-1Q99801 234 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RXFP3Q9NSD7 469 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MGAT4CQ9UBM8 478 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 DSPPQ9NZW4 1301 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 XKRYO14609 159 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 OIP5O43482 229 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 STK17BO94768 372 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 LIPCP11150 499 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 PRKCAP17252 672 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ATF1P18846 271 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 DLSTP36957 453 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MNDAP41218 407 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 GAB4Q2WGN9 574 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM184AQ6ZMB5 413 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RNF113BQ8IZP6 322 aaKnown RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 COQ8AQ8NI60 647 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 SENP5Q96HI0 755 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF350Q9GZX5 532 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.53□□□□□ -1.685e-7■■□□□ 12.5
SMAD4-202ENST00000398417 NUDT15Q9NV35 164 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MRPS18AQ9NVS2 196 aaKnown RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 EDARQ9UNE0 448 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 A0A0A6YYJ9 748 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MAOAP21397 527 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 CCR9P51686 369 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ARFIP1P53367 373 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 GALEQ14376 348 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MELKQ14680 651 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ALG10Q5BKT4 473 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TSTD1Q8NFU3 115 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ZPLD1Q8TCW7 415 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 THAP3Q8WTV1 239 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MBD3L1Q8WWY6 194 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RIT1Q92963 219 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RNF170Q96K19 258 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 Q96M85 177 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 CMKLR1Q99788 373 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 PDCD1LG2Q9BQ51 273 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 SLX1AQ9BQ83 275 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TRIP12Q14669 1992 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 KIAA1324LA8MWY0 1029 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 HRGP04196 525 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MYF5P13349 255 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ST6GAL1P15907 406 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RPL22L1Q6P5R6 122 aaKnown RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MARCH3Q86UD3 253 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ELMOD2Q8IZ81 293 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 FCAMRQ8WWV6 532 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TOE1Q96GM8 510 aaKnown RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 CCDC120Q96HB5 630 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TTYH1Q9H313 450 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 POLHQ9Y253 713 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 SLC35A3Q9Y2D2 325 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TIMM8BQ9Y5J9 83 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ENTPD2Q9Y5L3 495 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RAB3DO95716 219 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 WNT1P04628 370 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 SLC35E2P0CK97 266 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ANXA3P12429 323 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 HIST1H1CP16403 213 aaKnown RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 DUTP33316 252 aaKnown RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 EVI2BP34910 448 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 SQSTM1Q13501 440 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 FAM69AQ5T7M9 428 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TUSC5Q8IXB3 177 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 POGLUT1Q8NBL1 392 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 OR4D9Q8NGE8 314 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 GIMAP1Q8WWP7 306 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 DMRTA2Q96SC8 542 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ABRACLQ9P1F3 81 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 MN1Q10571 1320 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 C4BPBP20851 252 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 MAP3K8P41279 467 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 TSFMP43897 325 aaKnown RBP4.53□□□□□ -1.69
SMAD4-202ENST00000398417 UBE2MP61081 183 aaKnown RBP4.53□□□□□ -1.69
SMAD4-202ENST00000398417 RRAS2P62070 204 aaPredicted RBP4.53□□□□□ -1.69
SMAD4-202ENST00000398417 PLCXD2Q0VAA5 305 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 FGFBP1Q14512 234 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 PRAMEF8Q5VWM4 474 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 PRAMEF7Q5VXH5 474 aa4.53□□□□□ -1.69
SMAD4-202ENST00000398417 LNX2Q8N448 690 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms