RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 SLC46A3Q7Z3Q1 461 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 KRTAP1-3Q8IUG1 177 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 NKAIN4Q8IVV8 208 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 C17orf78Q8N4C9 275 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 MUCL1Q96DR8 90 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 OR2M2Q96R28 347 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 PIP5K1AQ99755 562 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 ASPNQ9BXN1 380 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 ESRP2Q9H6T0 727 aaKnown RBP14.65□□□□□ -0.06
APTR-201ENST00000398043 UBTD1Q9HAC8 227 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 NGBQ9NPG2 151 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 SLC17A5Q9NRA2 495 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 RIMS3Q9UJD0 308 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 A4GNTQ9UNA3 340 aa14.65□□□□□ -0.06
APTR-201ENST00000398043 FLNAP21333 2647 aaKnown RBP14.64□□□□□ -0.07
APTR-201ENST00000398043 ZNF469Q96JG9 3925 aaPredicted RBP14.64□□□□□ -0.07
APTR-201ENST00000398043 NDUFAB1O14561 156 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 HS3ST1O14792 307 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 IGF2P01344 180 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 ASAH2BP0C7U1 165 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 THRBP10828 461 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 PUDPQ08623 228 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 PMS2P3Q13401 168 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 FXNQ16595 210 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 ALKBH2Q6NS38 261 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 DEF8Q6ZN54 512 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 C20orf204Q6ZNR8 217 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 TSEN54Q7Z6J9 526 aaKnown RBP14.64□□□□□ -0.07
APTR-201ENST00000398043 PXKQ7Z7A4 578 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 VTCN1Q7Z7D3 282 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 LRRC17Q8N6Y2 441 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 ANKK1Q8NFD2 765 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 OR5J2Q8NH18 312 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 OR52N5Q8NH56 324 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 TPD52L3Q96J77 140 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 ALKBH3Q96Q83 286 aaPredicted RBP14.64□□□□□ -0.07
APTR-201ENST00000398043 NELFAQ9H3P2 528 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 FKRPQ9H9S5 495 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 ARL8BQ9NVJ2 186 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 BEX4Q9NWD9 120 aaPredicted RBP14.64□□□□□ -0.07
APTR-201ENST00000398043 TAS2R5Q9NYW4 299 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 RNF115Q9Y4L5 304 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 SNX13Q9Y5W8 968 aa14.64□□□□□ -0.07
APTR-201ENST00000398043 CHD3Q12873 2000 aaKnown RBP14.63□□□□□ -0.07
APTR-201ENST00000398043 A0A1W2PR80 420 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 SHISA9B4DS77 424 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 FFAR1O14842 300 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 CH25HO95992 272 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 RBM34P42696 430 aaKnown RBP14.63□□□□□ -0.07
APTR-201ENST00000398043 UGT2B15P54855 530 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 TGFBR3Q03167 851 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 ZP4Q12836 540 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 C1DQ13901 141 aaKnown RBP14.63□□□□□ -0.07
APTR-201ENST00000398043 PHYHD1Q5SRE7 291 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 ABHD12BQ7Z5M8 362 aaPredicted RBP14.63□□□□□ -0.07
APTR-201ENST00000398043 UEVLDQ8IX04 471 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 ZNF611Q8N823 705 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 OR1K1Q8NGR3 316 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 TMEM255BQ8WV15 326 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 LIPHQ8WWY8 451 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 BCL2L2Q92843 193 aaPredicted RBP14.63□□□□□ -0.07
APTR-201ENST00000398043 NEUROG1Q92886 237 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 TXNDC15Q96J42 360 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 LRRC37BQ96QE4 947 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 CCT8L2Q96SF2 557 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 KCTD14Q9BQ13 255 aaPredicted RBP14.63□□□□□ -0.07
APTR-201ENST00000398043 SPAG4Q9NPE6 437 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 NOX1Q9Y5S8 564 aa14.63□□□□□ -0.07
APTR-201ENST00000398043 ZNF587BE7ETH6 402 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 PRSS23O95084 383 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 MT-ND1P03886 318 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 CD3EP07766 207 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 TSPAN19P0C672 248 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 NQO1P15559 274 aaKnown RBP14.62□□□□□ -0.07
APTR-201ENST00000398043 NCK1P16333 377 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 HOXC12P31275 282 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 TAS2R41P59536 307 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 POU3F1Q03052 451 aaPredicted RBP14.62□□□□□ -0.07
APTR-201ENST00000398043 C10orf53Q8N6V4 93 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 KBTBD8Q8NFY9 601 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 PFN4Q8NHR9 129 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 LZICQ8WZA0 190 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 AKAP1Q92667 903 aaKnown RBP eCLIP14.62□□□□□ -0.07
APTR-201ENST00000398043 PIGTQ969N2 578 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 ZNF837Q96EG3 531 aaPredicted RBP14.62□□□□□ -0.07
APTR-201ENST00000398043 LRR1Q96L50 414 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 PRRC1Q96M27 445 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 GPR35Q9HC97 309 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 MAN2C1Q9NTJ4 1040 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 C20orf141Q9NUB4 165 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 MED29Q9NX70 200 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 CD300AQ9UGN4 299 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 TAGLN3Q9UI15 199 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 ZNF229Q9UJW7 825 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 AMDHD2Q9Y303 409 aa14.62□□□□□ -0.07
APTR-201ENST00000398043 SLC35F4A4IF30 521 aa14.61□□□□□ -0.07
APTR-201ENST00000398043 KPNA4O00629 521 aaPredicted RBP14.61□□□□□ -0.07
APTR-201ENST00000398043 SLC43A1O75387 559 aa14.61□□□□□ -0.07
APTR-201ENST00000398043 DCTN3O75935 186 aa14.61□□□□□ -0.07
APTR-201ENST00000398043 SERPINA1P01009 418 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms