RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SLC35A3Q9Y2D2 325 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 NPFFR2Q9Y5X5 522 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 EPXP11678 715 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 MPGP29372 298 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 AP3S2P59780 193 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 GPM6BQ13491 265 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 RPE65Q16518 533 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 DEFB134Q4QY38 66 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 FAM74A1Q5RGS3 127 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 HES5Q5TA89 166 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 AGBL4Q5VU57 503 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 JAZF1Q86VZ6 243 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 CBLN2Q8IUK8 224 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 SERPINA12Q8IW75 414 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 ARMC10Q8N2F6 343 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 OR14A16Q8NHC5 309 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF671Q8TAW3 534 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 THEM6Q8WUY1 208 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 ZMYND19Q96E35 227 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 IER2Q9BTL4 223 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 PLEKHA1Q9HB21 404 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 MEPEQ9NQ76 525 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 ABRACLQ9P1F3 81 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 ST6GALNAC2Q9UJ37 374 aa14.66□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF860A6NHJ4 632 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 FLRT2O43155 660 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 RAD1O60671 282 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 AGR2O95994 175 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 CA3P07451 260 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF3P17036 446 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 EN2P19622 333 aaPredicted RBP14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 SLC2A5P22732 501 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 DCST2Q5T1A1 773 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 ELP2Q6IA86 826 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 FAM109BQ6ICB4 259 aaPredicted RBP14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF613Q6PF04 617 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 C7orf61Q8IZ16 206 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF619Q8N2I2 560 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 OR2L13Q8N349 312 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 OR4K14Q8NGD5 310 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 LGALS14Q8TCE9 139 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 FGF13Q92913 245 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 PIGMQ9H3S5 423 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 PHPT1Q9NRX4 125 aaPredicted RBP14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 MED31Q9Y3C7 131 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 UNC80Q8N2C7 3258 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 REV3LO60673 3130 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 PMS2P1A4D2B8 440 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 HTR3BO95264 441 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 EGFP01133 1207 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 CNR1P21554 472 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 TSFMP43897 325 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 Q3ZCU0 254 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF425Q6IV72 752 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 MOB3CQ70IA8 216 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 TMEFF1Q8IYR6 380 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 RNF113BQ8IZP6 322 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 UTP23Q9BRU9 249 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 ZNF350Q9GZX5 532 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 CAPN10Q9HC96 672 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 PRDM9Q9NQV7 894 aa14.65□□□□□ -0.06
CHMP1A-201ENST00000397901 CRYBA1P05813 215 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 THBS1P07996 1170 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 RPA2P15927 270 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 NAA10P41227 235 aaPredicted RBP14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 DCDP81605 110 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 SNTB1Q13884 538 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 AMZ1Q400G9 498 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 ZNF614Q8N883 585 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 COX18Q8N8Q8 333 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 TMEM185AQ8NFB2 350 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 GAL3ST3Q96A11 431 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 DERL3Q96Q80 235 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 OR14A2Q96R54 314 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 TNFRSF13CQ96RJ3 184 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 USP34Q70CQ2 3546 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 A0A1W2PP55 124 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 TMEM218A2RU14 115 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 OR6C68A6NDL8 312 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 LRRC72A6NJI9 287 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 STX11O75558 287 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 CEACAM5P06731 702 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 DBIP07108 87 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 NID1P14543 1247 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 BTF3P20290 206 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 STARP49675 285 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 TMPRSS11FQ6ZWK6 438 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 LINGO2Q7L985 606 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 TIMM29Q9BSF4 260 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 MFFQ9GZY8 342 aa14.64□□□□□ -0.07
CHMP1A-201ENST00000397901 TBC1D3EA0A087X179 549 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 WRBO00258 174 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 ST8SIA5O15466 376 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 GP1BAP07359 652 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 MGMTP16455 207 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 TYRP1P17643 537 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 ANXA7P20073 488 aaKnown RBP14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 FCARP24071 287 aa14.63□□□□□ -0.07
CHMP1A-201ENST00000397901 MECP2P51608 486 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms