RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 GDE1Q9NZC3 331 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF629Q9UEG4 869 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 INSL6Q9Y581 213 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF638Q14966 1978 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TRABD2BA6NFA1 517 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TNFSF12O43508 249 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 B3GALT2O43825 422 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 DNAJB6O75190 326 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MOSPD3O75425 235 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 FBXO24O75426 580 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 KAT7O95251 611 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CTSOP43234 321 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ACTBP60709 375 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 UBE2MP61081 183 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ACTG1P63261 375 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CHAF1BQ13112 559 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 KIAA0141Q14154 515 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 IRF4Q15306 451 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 OR52E2Q8NGJ4 325 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TRMT61AQ96FX7 289 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SLC41A3Q96GZ6 507 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MENTQ9BUN1 341 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MS4A7Q9GZW8 240 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 KCNIP3Q9Y2W7 256 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CPT2P23786 658 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 BDKRB2P30411 391 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MAT2AP31153 395 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SERPINF1P36955 418 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CCR9P51686 369 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MAP2K6P52564 334 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 NRG3P56975 720 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SNRPEP62304 92 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 GRM7Q14831 915 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 PDSS1Q5T2R2 415 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 DMKNQ6E0U4 476 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 FCRLAQ7L513 359 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 OVCH1Q7RTY7 1134 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CCDC116Q8IYX3 515 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MRPL43Q8N983 215 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ACOT4Q8N9L9 421 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 OR5AK2Q8NH90 309 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 RSPRY1Q96DX4 576 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 DNAJA3Q96EY1 480 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 USB1Q9BQ65 265 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 LYRM4Q9HD34 91 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SOHLH2Q9NX45 425 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF107Q9UII5 783 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SCML1Q9UN30 329 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF175Q9Y473 711 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 PUS1Q9Y606 427 aaKnown RBP eCLIP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TDRD15B5MCY1 1934 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 TMEM202A6NGA9 273 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 GGT3PA6NGU5 568 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SNRPGP15A8MWD9 76 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SPINT1O43278 529 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SCGB1D1O95968 90 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 HLA-AP01891 365 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 HCKP08631 526 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 OR2T7P0C7T2 308 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CMPK1P30085 196 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MMP15P51511 669 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 DHODHQ02127 395 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CLINT1Q14677 625 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SLC35D3Q5M8T2 416 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 GPR157Q5UAW9 335 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 OR10K2Q6IF99 312 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 NIPAL3Q6P499 406 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ADGRG3Q86Y34 549 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 GLB1L2Q8IW92 636 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 OR2T27Q8NH04 317 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 GPX7Q96SL4 187 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ACKR4Q9NPB9 350 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 THAP10Q9P2Z0 257 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 KIAA1671Q9BY89 1806 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 H7C417 338 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 K7EPK0 472 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 HYAL3O43820 417 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 IL5P05113 134 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 GYPBP06028 91 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 IGFBP1P08833 259 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SLC35G6P0C7Q6 338 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 G0S2P27469 103 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 AKT2P31751 481 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF705AQ6ZN79 300 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF679Q8IYX0 411 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SPICQ8N5J4 248 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 FAM71E2Q8N5Q1 922 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 OR1M1Q8NGA1 313 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SNIP1Q8TAD8 396 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 GAL3ST4Q96RP7 486 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 HINT3Q9NQE9 182 aaKnown RBP5.03□□□□□ -1.6
PTPRD-205ENST00000397611 SMCO4Q9NRQ5 59 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 MIA3Q5JRA6 1907 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 VWA8A3KMH1 1905 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 EFCAB7A8K855 629 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 H7C1Q1 480 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 J3QRE1 110 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CDK2AP1O14519 115 aa5.03□□□□□ -1.6
PTPRD-205ENST00000397611 CHRM4P08173 479 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms