RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 F8P00451 2351 aa12.89□□□□□ -0.35
SEC13-208ENST00000397109 ELOA3DA6NLF2 546 aaPredicted RBP12.88□□□□□ -0.35
SEC13-208ENST00000397109 H0YAE9 185 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 SOCS2O14508 198 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 GNGT2O14610 69 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 KLF4O43474 513 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 TPST1O60507 370 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 NPIPB7O75200 414 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 AHSA1O95433 338 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 PNMTP11086 282 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 ARHGDIAP52565 204 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 RGS8P57771 180 aaPredicted RBP12.88□□□□□ -0.35
SEC13-208ENST00000397109 HOXC5Q00444 222 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 NRF1Q16656 503 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 DUSP7Q16829 419 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 ELOA3BQ3SY89 546 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 FBXW9Q5XUX1 488 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 BHLHA15Q7RTS1 189 aaPredicted RBP12.88□□□□□ -0.35
SEC13-208ENST00000397109 HIPK1Q86Z02 1210 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 ELOA3Q8NG57 546 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 GPR32P1Q8NGA4 272 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 LZICQ8WZA0 190 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 TFAP2CQ92754 450 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 S100PBPQ96BU1 408 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 ANKRD60Q9BZ19 345 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 NTN4Q9HB63 628 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 TMEM27Q9HBJ8 222 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 USE1Q9NZ43 259 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 SELENONQ9NZV5 590 aa12.88□□□□□ -0.35
SEC13-208ENST00000397109 PRRC2AP48634 2157 aaKnown RBP12.88□□□□□ -0.35
SEC13-208ENST00000397109 A0A1B0GWA3 101 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 A0A1W2PPR1 153 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 AQP7P3A6NL99 342 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 G3V2T6 193 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 RAMP1O60894 148 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 VAMP5O95183 116 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 TNFAIP8O95379 198 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 LGI1O95970 557 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 OPN1SWP03999 348 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 SEMG1P04279 462 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 ZNF23P17027 643 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 ALDH3A2P51648 485 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 SELENOWP63302 87 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 RFX4Q33E94 735 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 LRRC23Q53EV4 343 aaPredicted RBP12.87□□□□□ -0.35
SEC13-208ENST00000397109 CYBRD1Q53TN4 286 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 TMEM225Q6GV28 225 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 ULK3Q6PHR2 472 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 UGT2A3Q6UWM9 527 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 COMTD1Q86VU5 262 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 RANBP3LQ86VV4 465 aaPredicted RBP12.87□□□□□ -0.35
SEC13-208ENST00000397109 P2RY8Q86VZ1 359 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 WFDC8Q8IUA0 241 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 EPHX4Q8IUS5 362 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 UBE2J2Q8N2K1 259 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 OR5K1Q8NHB7 308 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 MFSD8Q8NHS3 518 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 CXXC4Q9H2H0 198 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 SMPD3Q9NY59 655 aaPredicted RBP12.87□□□□□ -0.35
SEC13-208ENST00000397109 FLVCR1Q9Y5Y0 555 aa12.87□□□□□ -0.35
SEC13-208ENST00000397109 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.86□□□□□ -0.35
SEC13-208ENST00000397109 SAC3D1A6NKF1 404 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 OR2T1O43869 369 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 AKR7A3O95154 331 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 ATE1O95260 518 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 FABP3P05413 133 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 ITGA2P17301 1181 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 COX5AP20674 150 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 LOXP28300 417 aaPredicted RBP12.86□□□□□ -0.35
SEC13-208ENST00000397109 ALG10BQ5I7T1 473 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 TMEM154Q6P9G4 183 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 CASP12Q6UXS9 341 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 ZDHHC21Q8IVQ6 265 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 TMEM99Q8N816 258 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 SMYD1Q8NB12 490 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 ALPK1Q96QP1 1244 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 ARHGDIGQ99819 225 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 RBM4BQ9BQ04 359 aaKnown RBP12.86□□□□□ -0.35
SEC13-208ENST00000397109 RBM4Q9BWF3 364 aaKnown RBP12.86□□□□□ -0.35
SEC13-208ENST00000397109 ASB6Q9NWX5 421 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 RASD1Q9Y272 281 aa12.86□□□□□ -0.35
SEC13-208ENST00000397109 A6NHS1 94 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 FMO6PO60774 539 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 LYZL6O75951 148 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 IGHV1-2P23083 117 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 EDNRAP25101 427 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 HTR2AP28223 471 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 GTF2E2P29084 291 aaKnown RBP12.85□□□□□ -0.35
SEC13-208ENST00000397109 RPS6KA3P51812 740 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 DAG1Q14118 895 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 OR1Q1Q15612 314 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 TSC22D1Q15714 1073 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 TAB1Q15750 504 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 SLC36A3Q495N2 470 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 TIMM23BQ5SRD1 257 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 OR2T5Q6IEZ7 315 aa12.85□□□□□ -0.35
SEC13-208ENST00000397109 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms